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D. rerio Gene: cobll1b - ENSDARG00000102829 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000102829
Namecobll1b
Descriptioncordon-bleu WH2 repeat protein-like 1b [Source:ZFIN;Acc:ZDB-GENE-120313-6]
OrganismDanio rerio (zebrafish)
Synonym(s)cobll1, fa10e05, sb:cb819, si:ch73-76o7.1, wu:fa10e05
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
1.37e3
  • 1.37e3
  • 3.15e3
  • 4.09e3
  • 4.84e3
  • 6.56e3
  • 9.74e3
95.43
  • 95.43
  • 89.44
  • 86.30
  • 83.81
  • 78.04
  • 67.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.52e3
  • 2.52e3
91.57
  • 91.57
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.57e3
  • 2.57e3
91.39
  • 91.39
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
2.67e3
  • 2.67e3
  • 3.17e3
  • 8.89e3
  • 9.41e3
  • 9.58e3
91.06
  • 91.06
  • 89.40
  • 70.23
  • 68.48
  • 67.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.69e3
  • 2.69e3
90.99
  • 90.99
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.90e3
  • 2.90e3
90.30
  • 90.30
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
3.06e3
  • 3.06e3
  • 1.29e4
  • 1.31e4
  • 1.35e4
  • 1.37e4
89.76
  • 89.76
  • 56.65
  • 56.23
  • 54.73
  • 54.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
3.53e3
  • 3.53e3
  • 4.13e3
  • 5.11e3
  • 5.68e3
  • 6.36e3
  • 7.02e3
  • 7.33e3
  • 7.79e3
  • 1.07e4
  • 1.45e4
88.18
  • 88.18
  • 86.17
  • 82.88
  • 80.98
  • 78.72
  • 76.49
  • 75.44
  • 73.91
  • 64.14
  • 51.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.71e3
  • 3.71e3
  • 1.01e4
87.58
  • 87.58
  • 66.04
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000106zygote stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
4.39e3
  • 4.39e3
  • 4.59e3
  • 4.86e3
  • 5.57e3
  • 6.23e3
  • 6.77e3
  • 9.22e3
  • 9.33e3
  • 9.69e3
  • 1.01e4
  • 1.10e4
  • 1.13e4
  • 1.14e4
  • 1.18e4
85.31
  • 85.31
  • 84.65
  • 83.72
  • 81.34
  • 79.13
  • 77.34
  • 69.13
  • 68.77
  • 67.55
  • 66.19
  • 63.16
  • 62.09
  • 61.73
  • 60.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.12e3
  • 5.12e3
82.86
  • 82.86
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.52e3
  • 5.52e3
81.52
  • 81.52
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
5.52e3
  • 5.52e3
  • 9.30e3
81.51
  • 81.51
  • 68.87
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.99e3
  • 5.99e3
79.94
  • 79.94
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
6.26e3
  • 6.26e3
  • 1.26e4
79.05
  • 79.05
  • 57.94
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.78e3
  • 6.78e3
77.29
  • 77.29
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
7.10e3
  • 7.10e3
  • 9.83e3
  • 1.23e4
76.23
  • 76.23
  • 67.09
  • 58.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
8.66e3
  • 8.66e3
71.01
  • 71.01
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.75e3
  • 8.75e3
70.70
  • 70.70
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.07e3
  • 9.07e3
69.62
  • 69.62
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.86
  • 65.86
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
  • 1.33e4
64.55
  • 64.55
  • 55.54
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.14e4
  • 1.14e4
61.83
  • 61.83
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.15
  • 58.15
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.91
  • 56.91
AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
1.31e4
  • 1.31e4
  • 1.38e4
  • 1.39e4
  • 1.39e4
56.23
  • 56.23
  • 53.83
  • 53.55
  • 53.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.86
  • 53.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

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