D. rerio Gene: zgc:171220 - ENSDARG00000102959 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000102959
Namezgc:171220
Descriptionzgc:171220 [Source:ZFIN;Acc:ZDB-GENE-071004-11]
OrganismDanio rerio (zebrafish)
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.76e3
  • 3.76e3
87.41
  • 87.41
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.06e3
  • 4.06e3
86.39
  • 86.39
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
5.90e3
  • 5.90e3
  • 8.93e3
80.24
  • 80.24
  • 70.09
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.01e3
  • 8.01e3
73.19
  • 73.19
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.69e3
  • 8.69e3
70.91
  • 70.91
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
8.93e3
  • 8.93e3
  • 9.95e3
70.11
  • 70.11
  • 66.69
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.79e3
  • 9.79e3
67.23
  • 67.23
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.04
  • 65.04
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.09
  • 63.09
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
  • 1.50e4
61.83
  • 61.83
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.17
  • 59.17
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.74
  • 55.74
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.88
  • 54.88
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.37e4
  • 1.37e4
  • 1.42e4
54.26
  • 54.26
  • 52.58
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.37e4
  • 1.37e4
  • 1.62e4
54.04
  • 54.04
  • 45.63
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.38e4
  • 1.38e4
53.71
  • 53.71
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.42e4
  • 1.42e4
  • 1.66e4
  • 1.71e4
  • 1.77e4
  • 1.88e4
52.45
  • 52.45
  • 44.36
  • 42.77
  • 40.83
  • 37.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.92
  • 51.92
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
  • 2.28e4
48.77
  • 48.77
  • 23.79
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.30
  • 47.30
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
44.93
  • 44.93
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.63
  • 43.63
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
40.03
  • 40.03
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000102959.

Cross-references

EnsemblENSDARG00000102959 (zgc:171220)
ZFINZDB-GENE-071004-11 (zgc:171220)
EMBLBX510922
Uniprot/SPTREMBLF1QBK6, F1QBK6_DANRE

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