We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

D. rerio Gene: rab9b - ENSDARG00000103391 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000103391
Namerab9b
DescriptionRAB9B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-091118-112]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-169h1.8
Orthologs(s)24 orthologs
Paralog(s)100 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.18e3
  • 6.18e3
79.29
  • 79.29
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.99e3
  • 6.99e3
76.61
  • 76.61
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
7.40e3
  • 7.40e3
75.22
  • 75.22
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.14
  • 66.14
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.03e4
  • 1.03e4
  • 1.12e4
  • 1.29e4
  • 1.38e4
  • 1.47e4
65.45
  • 65.45
  • 62.55
  • 56.97
  • 53.76
  • 50.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.03e4
  • 1.03e4
  • 1.11e4
65.39
  • 65.39
  • 62.86
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.80
  • 64.80
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
  • 1.44e4
62.00
  • 62.00
  • 51.78
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.17e4
  • 1.17e4
60.99
  • 60.99
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.18e4
  • 1.18e4
  • 1.70e4
60.35
  • 60.35
  • 43.24
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.90
  • 58.90
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.87
  • 57.87
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.32e4
  • 1.32e4
  • 1.56e4
55.87
  • 55.87
  • 47.62
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.63
  • 55.63
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.59
  • 55.59
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.35e4
  • 1.35e4
54.81
  • 54.81
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.03
  • 54.03
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.57
  • 50.57
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.33
  • 49.33
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.21
  • 47.21
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.61e4
  • 1.61e4
  • 1.82e4
46.12
  • 46.12
  • 38.97
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.69
  • 42.69
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.88
  • 41.88
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
31.93
  • 31.93
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
26.89
  • 26.89
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000103391.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Opisthokonta23 genesCompare expression
Eukaryota100 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000103391.

Cross-references

EnsemblENSDARG00000103391 (rab9b)
ZFINZDB-GENE-091118-112 (rab9b)
EMBLCR753843
Uniprot/SPTREMBLE7F8G0, E7F8G0_DANRE

Do not show this banner again