D. rerio Gene: sar1b - ENSDARG00000103403 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000103403
Namesar1b
Descriptionsecretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
OrganismDanio rerio (zebrafish)
Synonym(s)sara2, sara2 {eco:0000313|embl:aah59552.1,gn eco:0000313|zfin:zdb-gene-040426-1958}, zgc:73204
Orthologs(s)42 orthologs
Paralog(s)31 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0004707pharyngula stage
779
  • 779
  • 1.28e3
  • 1.32e3
  • 1.97e3
  • 2.21e3
  • 2.35e3
  • 2.35e3
  • 2.40e3
  • 2.56e3
  • 3.12e3
97.39
  • 97.39
  • 95.73
  • 95.59
  • 93.42
  • 92.61
  • 92.14
  • 92.14
  • 91.96
  • 91.42
  • 89.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
955
  • 955
96.81
  • 96.81
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
998
  • 998
96.66
  • 96.66
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.01e3
  • 1.01e3
96.61
  • 96.61
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
1.08e3
  • 1.08e3
  • 3.29e3
  • 1.21e4
96.39
  • 96.39
  • 88.98
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.20e3
  • 1.20e3
96.00
  • 96.00
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.26e3
  • 1.26e3
  • 1.31e4
95.79
  • 95.79
  • 56.24
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.26e3
  • 1.26e3
  • 2.18e3
95.77
  • 95.77
  • 92.72
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.29e3
  • 1.29e3
  • 2.97e3
95.68
  • 95.68
  • 90.07
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
1.45e3
  • 1.45e3
  • 1.75e3
  • 2.00e3
  • 2.02e3
  • 2.02e3
  • 2.83e3
95.13
  • 95.13
  • 94.14
  • 93.31
  • 93.24
  • 93.23
  • 90.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.64e3
  • 1.64e3
94.53
  • 94.53
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • ZFS:0000049segmentation
  • UBERON:0000104life cycle
1.79e3
  • 1.79e3
  • 1.85e3
  • 1.86e3
  • 1.91e3
  • 1.97e3
  • 2.08e3
  • 2.12e3
  • 2.13e3
  • 2.19e3
  • 2.23e3
  • 2.35e3
  • 2.39e3
  • 2.90e3
  • 4.15e3
  • 1.41e4
  • 1.43e4
  • 1.45e4
  • 1.50e4
94.00
  • 94.00
  • 93.79
  • 93.77
  • 93.61
  • 93.42
  • 93.03
  • 92.89
  • 92.89
  • 92.66
  • 92.54
  • 92.13
  • 91.99
  • 90.30
  • 86.12
  • 52.63
  • 51.99
  • 51.51
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.99e3
  • 1.99e3
  • 2.58e3
  • 3.61e3
  • 3.72e3
93.36
  • 93.36
  • 91.35
  • 87.90
  • 87.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.05e3
  • 2.05e3
93.13
  • 93.13
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.18e3
  • 2.18e3
92.70
  • 92.70
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.43e3
  • 2.43e3
91.85
  • 91.85
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.45e3
  • 2.45e3
  • 2.78e3
  • 5.83e3
91.80
  • 91.80
  • 90.69
  • 80.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.50e3
  • 2.50e3
91.64
  • 91.64
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.57e3
  • 2.57e3
91.38
  • 91.38
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.65e3
  • 2.65e3
91.13
  • 91.13
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.71e3
  • 2.71e3
90.94
  • 90.94
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.72e3
  • 2.72e3
90.89
  • 90.89
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
2.75e3
  • 2.75e3
90.81
  • 90.81
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.75e3
  • 2.75e3
90.79
  • 90.79
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
3.02e3
  • 3.02e3
  • 3.22e3
  • 3.25e3
  • 6.93e3
  • 7.14e3
89.90
  • 89.90
  • 89.23
  • 89.13
  • 76.80
  • 76.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000035Larval:Protruding-mouth
3.25e3
  • 3.25e3
  • 3.34e3
  • 9.96e3
  • 1.34e4
  • 1.36e4
89.12
  • 89.12
  • 88.82
  • 66.67
  • 54.99
  • 54.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.26e3
  • 3.26e3
89.10
  • 89.10
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.99e3
  • 3.99e3
86.66
  • 86.66
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.05e3
  • 4.05e3
86.45
  • 86.45
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.09e3
  • 4.09e3
86.31
  • 86.31
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.79e3
  • 5.79e3
80.63
  • 80.63
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
5.97e3
  • 5.97e3
  • 1.44e4
  • 1.50e4
80.00
  • 80.00
  • 51.88
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.34e3
  • 9.34e3
68.72
  • 68.72
AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
1.07e4
  • 1.07e4
  • 1.12e4
64.28
  • 64.28
  • 62.49
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • ZFS:0000036Larval:Day 4
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0002539pharyngeal arch
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
1.12e4
  • 1.12e4
  • 1.36e4
62.50
  • 62.50
  • 54.53
AEIR
  • AEIR
  • AEIR
UBERON:0000923germ layer
  • ZFS:0000024Segmentation:5-9 somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0010202lateral line
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
UBERON:0001277intestinal epithelium
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
ZFA:0000093blastomere (Danio)
  • UBERON:0000106zygote stage
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species35 genesCompare expression
Bilateria25 species42 genesCompare expression

Orthology information comes from OMA : ENSDARG00000103403.

Paralogs (same species)

Cross-references

EnsemblENSDARG00000103403 (sar1b)
ZFINZDB-GENE-040426-1958 (sar1b)
EMBLBC059552, CU302316
Uniprot/SPTREMBLQ6PBX2, Q6PBX2_DANRE

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