D. rerio Gene: slc1a8a - ENSDARG00000104204 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000104204
Nameslc1a8a
Descriptionsolute carrier family 1 (glutamate transporter), member 8a [Source:ZFIN;Acc:ZDB-GENE-101111-8]
OrganismDanio rerio (zebrafish)
Synonym(s)eaat6a
Orthologs(s)2 orthologs
Paralog(s)11 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
880
  • 880
97.06
  • 97.06
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.86e3
  • 4.86e3
  • 1.53e4
83.73
  • 83.73
  • 48.91
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
6.31e3
  • 6.31e3
  • 1.84e4
  • 2.77e4
78.88
  • 78.88
  • 38.38
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.42e3
  • 7.42e3
75.17
  • 75.17
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.31e4
  • 1.31e4
  • 2.54e4
56.21
  • 56.21
  • 14.92
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.35e4
  • 1.35e4
54.77
  • 54.77
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.45e4
  • 1.45e4
51.38
  • 51.38
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.60e4
  • 1.60e4
46.40
  • 46.40
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.72
  • 38.72
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi2 species2 genesCompare expression

Orthology information comes from OMA : ENSDARG00000104204.

Paralogs (same species)

Cross-references

EnsemblENSDARG00000104204 (slc1a8a)
ZFINZDB-GENE-101111-8 (slc1a8a)
EMBLCR550302, HM138700
Uniprot/SPTREMBLD7RVS6, D7RVS6_DANRE, F1RAC5, F1RAC5_DANRE

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