D. rerio Gene: FMNL1 (1 to many) - ENSDARG00000104263 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000104263
NameFMNL1 (1 to many)
Descriptionformin like 1 [Source:HGNC Symbol;Acc:HGNC:1212]
OrganismDanio rerio (zebrafish)
Synonym(s)c17orf1, c17orf1b, fmnl
Orthologs(s)24 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.65e3
  • 1.65e3
94.49
  • 94.49
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.40e3
  • 2.40e3
91.98
  • 91.98
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.81
  • 64.81
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.02
  • 62.02
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.72
  • 56.72
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.42e4
  • 1.42e4
52.33
  • 52.33
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.43e4
  • 1.43e4
52.14
  • 52.14
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.46e4
  • 1.46e4
  • 1.48e4
51.25
  • 51.25
  • 50.60
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.78
  • 47.78
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
1.58e4
  • 1.58e4
  • 1.93e4
  • 1.95e4
  • 2.32e4
46.97
  • 46.97
  • 35.46
  • 34.82
  • 22.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
46.94
  • 46.94
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.63e4
  • 1.63e4
  • 1.80e4
45.26
  • 45.26
  • 39.73
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.07
  • 43.07
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.40
  • 42.40
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.39
  • 41.39
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.73
  • 40.73
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.45
  • 39.45
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
35.94
  • 35.94
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.08e4
  • 2.08e4
  • 2.29e4
30.30
  • 30.30
  • 23.19
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000104263.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia3 genesCompare expression
Bilateria4 genesCompare expression
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000104263.

Cross-references

EnsemblENSDARG00000104263 (FMNL1 (1 to many))
HGNCHGNC:1212 (FMNL1 (1 to many))
EMBLCABZ01055364, CABZ01055365, CABZ01055366, FQ377634
Uniprot/SPTREMBLA0A0G2KD09, A0A0G2KD09_DANRE, A0A0G2KJ05, A0A0G2KJ05_DANRE

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