We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

D. rerio Gene: SBSPON - ENSDARG00000104507 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000104507
NameSBSPON
Descriptionsomatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
OrganismDanio rerio (zebrafish)
Synonym(s)c8orf84, rpesp
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.91e3
  • 6.91e3
76.87
  • 76.87
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.05e4
  • 1.05e4
64.69
  • 64.69
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.74
  • 57.74
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
  • 1.55e4
55.55
  • 55.55
  • 48.09
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.50
  • 55.50
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.41e4
  • 1.41e4
52.87
  • 52.87
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.86
  • 47.86
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.56
  • 45.56
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
1.65e4
  • 1.65e4
  • 2.04e4
  • 2.18e4
  • 2.27e4
  • 2.47e4
44.59
  • 44.59
  • 31.65
  • 26.90
  • 24.13
  • 17.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.33
  • 44.33
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.74e4
  • 1.74e4
41.65
  • 41.65
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.75e4
  • 1.75e4
41.51
  • 41.51
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.75e4
  • 1.75e4
  • 2.01e4
41.49
  • 41.49
  • 32.70
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.40
  • 36.40
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
28.74
  • 28.74
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.16e4
  • 2.16e4
27.62
  • 27.62
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.22e4
  • 2.22e4
25.66
  • 25.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000104507 (SBSPON)
HGNCHGNC:30362 (SBSPON)
EMBLCR318587, CR759896
Uniprot/SPTREMBLA0A0G2KRV3, A0A0G2KRV3_DANRE

Do not show this banner again