D. rerio Gene: SLC16A6 (1 to many) - ENSDARG00000104629 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000104629
NameSLC16A6 (1 to many)
Descriptionsolute carrier family 16 member 6 [Source:HGNC Symbol;Acc:HGNC:10927]
OrganismDanio rerio (zebrafish)
Synonym(s)mct6, mct7
Orthologs(s)19 orthologs
Paralog(s)19 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.37e3
  • 5.37e3
82.04
  • 82.04
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.80e3
  • 6.80e3
77.25
  • 77.25
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
9.45e3
  • 9.45e3
  • 1.20e4
  • 1.32e4
  • 1.57e4
  • 1.99e4
68.35
  • 68.35
  • 59.88
  • 55.74
  • 47.43
  • 33.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.30
  • 61.30
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.20e4
  • 1.20e4
  • 1.29e4
59.88
  • 59.88
  • 56.85
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.35e4
  • 1.35e4
54.65
  • 54.65
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
  • 1.60e4
50.17
  • 50.17
  • 46.39
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.37
  • 48.37
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.61
  • 47.61
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.07
  • 47.07
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.88
  • 46.88
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.62e4
  • 1.62e4
45.91
  • 45.91
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.68e4
  • 1.68e4
43.89
  • 43.89
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.80e4
  • 1.80e4
39.74
  • 39.74
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
32.91
  • 32.91
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.25e4
  • 2.25e4
24.69
  • 24.69
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression
Neopterygii2 genesCompare expression
Opisthokonta19 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000104629.

Cross-references

EnsemblENSDARG00000104629 (SLC16A6 (1 to many))
HGNCHGNC:10927 (SLC16A6 (1 to many))
EMBLFP885542
Uniprot/SPTREMBLA0A0G2KPX4, A0A0G2KPX4_DANRE, A0A0G2L0H0, A0A0G2L0H0_DANRE

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