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D. rerio Gene: phka1b - ENSDARG00000105039 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000105039
Namephka1b
Descriptionphosphorylase kinase, alpha 1b (muscle) [Source:ZFIN;Acc:ZDB-GENE-091204-81]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-22f5.10
Orthologs(s)25 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
358
  • 358
98.80
  • 98.80
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
381
  • 381
98.73
  • 98.73
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
434
  • 434
98.55
  • 98.55
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.75e3
  • 3.75e3
  • 1.97e4
87.46
  • 87.46
  • 33.94
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.63e3
  • 4.63e3
84.50
  • 84.50
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.91e3
  • 4.91e3
83.56
  • 83.56
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.97e3
  • 5.97e3
80.01
  • 80.01
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
6.01e3
  • 6.01e3
  • 1.10e4
  • 2.00e4
  • 2.07e4
  • 2.27e4
79.89
  • 79.89
  • 63.33
  • 33.12
  • 30.74
  • 24.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.84e3
  • 6.84e3
77.11
  • 77.11
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
7.20e3
  • 7.20e3
  • 1.67e4
75.89
  • 75.89
  • 44.12
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
7.44e3
  • 7.44e3
75.08
  • 75.08
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.34
  • 63.34
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.20
  • 51.20
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.94
  • 49.94
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.10
  • 45.10
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.01
  • 43.01
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.29
  • 42.29
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
40.12
  • 40.12
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.40
  • 37.40
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.89e4
  • 1.89e4
36.71
  • 36.71
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.30e4
  • 2.30e4
23.11
  • 23.11
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species19 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000105039.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000105039.

Cross-references

EnsemblENSDARG00000105039 (phka1b)
ZFINZDB-GENE-091204-81 (phka1b)
EMBLBX511168, CT025910
Uniprot/SPTREMBLA0A0M3HEN7, A0A0M3HEN7_DANRE

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