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E. caballus Gene: SEC24A - ENSECAG00000002321 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000002321
NameSEC24A
DescriptionSEC24 homolog A, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10703]
OrganismEquus caballus (horse)
Orthologs(s)18 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.33e3
  • 1.33e3
94.25
  • 94.25
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.79e3
  • 1.79e3
92.25
  • 92.25
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
2.26e3
  • 2.26e3
90.21
  • 90.21
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
2.65e3
  • 2.65e3
88.53
  • 88.53
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
4.54e3
  • 4.54e3
80.31
  • 80.31
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
5.48e3
  • 5.48e3
76.25
  • 76.25
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
5.48e3
  • 5.48e3
76.24
  • 76.24
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
5.55e3
  • 5.55e3
  • 6.30e3
75.96
  • 75.96
  • 72.68
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
5.63e3
  • 5.63e3
75.58
  • 75.58
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
5.65e3
  • 5.65e3
75.50
  • 75.50
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
5.68e3
  • 5.68e3
75.39
  • 75.39
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
5.97e3
  • 5.97e3
  • 6.86e3
74.10
  • 74.10
  • 70.28
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
6.47e3
  • 6.47e3
71.97
  • 71.97
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
6.61e3
  • 6.61e3
  • 7.54e3
  • 7.81e3
  • 8.49e3
71.36
  • 71.36
  • 67.29
  • 66.16
  • 63.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
6.81e3
  • 6.81e3
70.46
  • 70.46
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
6.83e3
  • 6.83e3
70.41
  • 70.41
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
6.94e3
  • 6.94e3
69.92
  • 69.92
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
6.95e3
  • 6.95e3
  • 7.12e3
69.89
  • 69.89
  • 69.14
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
7.05e3
  • 7.05e3
  • 7.32e3
69.43
  • 69.43
  • 68.27
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
7.92e3
  • 7.92e3
65.65
  • 65.65
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.21e3
  • 8.21e3
  • 8.46e3
64.43
  • 64.43
  • 63.32
AEIR
  • AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
9.05e3
  • 9.05e3
60.77
  • 60.77
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.75e3
  • 9.75e3
57.73
  • 57.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSECAG00000002321.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia1 geneCompare expression
Opisthokonta3 genesCompare expression

Paralogy information comes from OMA : ENSECAG00000002321.

Cross-references

EnsemblENSECAG00000002321 (SEC24A)
HGNCHGNC:10703 (SEC24A)
Uniprot/SPTREMBLF6S123, F6S123_HORSE, F6SQ27, F6SQ27_HORSE

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