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E. caballus Gene: SHD - ENSECAG00000005602 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000005602
NameSHD
DescriptionSrc homology 2 domain containing transforming protein D [Source:HGNC Symbol;Acc:HGNC:30633]
OrganismEquus caballus (horse)
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
4.87e3
  • 4.87e3
78.88
  • 78.88
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.21e3
  • 8.21e3
  • 9.33e3
64.40
  • 64.40
  • 59.55
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
54.57
  • 54.57
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.15e4
  • 1.15e4
  • 1.22e4
50.00
  • 50.00
  • 47.25
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.28e4
  • 1.28e4
  • 1.30e4
44.69
  • 44.69
  • 43.79
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
42.15
  • 42.15
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
41.63
  • 41.63
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
  • 1.48e4
  • 1.56e4
  • 1.74e4
41.60
  • 41.60
  • 36.04
  • 32.28
  • 24.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.51e4
  • 1.51e4
34.62
  • 34.62
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
33.12
  • 33.12
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.60e4
  • 1.60e4
30.44
  • 30.44
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSECAG00000005602.

Cross-references

EnsemblENSECAG00000005602 (SHD)
HGNCHGNC:30633 (SHD)
Uniprot/SPTREMBLF7AMT3, F7AMT3_HORSE

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