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E. caballus Gene: PMCH - ENSECAG00000005866 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000005866
NamePMCH
Descriptionpro-melanin concentrating hormone [Source:HGNC Symbol;Acc:HGNC:9109]
OrganismEquus caballus (horse)
Synonym(s)mch
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
4.43e3
  • 4.43e3
80.81
  • 80.81
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
8.71e3
  • 8.71e3
62.23
  • 62.23
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
9.10e3
  • 9.10e3
60.53
  • 60.53
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
9.82e3
  • 9.82e3
  • 1.15e4
  • 1.34e4
57.45
  • 57.45
  • 50.07
  • 41.93
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
  • 1.32e4
50.43
  • 50.43
  • 42.87
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.18e4
  • 1.18e4
48.73
  • 48.73
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
45.88
  • 45.88
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
43.54
  • 43.54
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.34e4
  • 1.34e4
41.91
  • 41.91
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
38.80
  • 38.80
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
37.69
  • 37.69
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.45e4
  • 1.45e4
  • 1.56e4
37.31
  • 37.31
  • 32.56
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
1.50e4
  • 1.50e4
34.94
  • 34.94
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.59e4
  • 1.59e4
31.01
  • 31.01
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.69e4
  • 1.69e4
26.72
  • 26.72
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
1.84e4
  • 1.84e4
20.16
  • 20.16
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.85e4
  • 1.85e4
19.60
  • 19.60
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.87e4
  • 1.87e4
18.89
  • 18.89
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.93e4
  • 1.93e4
16.23
  • 16.23
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression

Orthology information comes from OMA : ENSECAG00000005866.

Cross-references

EnsemblENSECAG00000005866 (PMCH)
HGNCHGNC:9109 (PMCH)
Uniprot/SPTREMBLF6ZGD8, F6ZGD8_HORSE

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