E. caballus Gene: RABAC1 - ENSECAG00000006670 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000006670
NameRABAC1
DescriptionRab acceptor 1 (prenylated) [Source:HGNC Symbol;Acc:HGNC:9794]
OrganismEquus caballus (horse)
Synonym(s)pra1, praf1, yip3
Orthologs(s)21 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
248
  • 248
98.93
  • 98.93
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
263
  • 263
  • 334
  • 452
  • 491
98.86
  • 98.86
  • 98.56
  • 98.04
  • 97.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
298
  • 298
98.71
  • 98.71
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
424
  • 424
98.16
  • 98.16
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
485
  • 485
97.90
  • 97.90
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
492
  • 492
97.87
  • 97.87
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
593
  • 593
97.43
  • 97.43
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
654
  • 654
  • 758
97.17
  • 97.17
  • 96.72
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
695
  • 695
96.99
  • 96.99
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
806
  • 806
96.51
  • 96.51
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
832
  • 832
96.40
  • 96.40
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
925
  • 925
95.99
  • 95.99
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.11e3
  • 1.11e3
  • 1.24e3
95.20
  • 95.20
  • 94.65
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.11e3
  • 1.11e3
  • 1.14e3
95.18
  • 95.18
  • 95.08
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.19e3
  • 1.19e3
94.86
  • 94.86
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.47e3
  • 1.47e3
93.61
  • 93.61
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.58e3
  • 1.58e3
93.17
  • 93.17
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.67e3
  • 1.67e3
92.75
  • 92.75
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
2.09e3
  • 2.09e3
  • 3.01e3
90.94
  • 90.94
  • 86.95
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
2.45e3
  • 2.45e3
89.39
  • 89.39
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.65e3
  • 2.65e3
  • 3.05e3
88.52
  • 88.52
  • 86.77
AEIR
  • AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
3.82e3
  • 3.82e3
83.44
  • 83.44
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
4.36e3
  • 4.36e3
81.09
  • 81.09
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
8.26e3
  • 8.26e3
64.19
  • 64.19
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression
Bilateria21 species21 genesCompare expression

Orthology information comes from OMA : ENSECAG00000006670.

Cross-references

EnsemblENSECAG00000006670 (RABAC1)
HGNCHGNC:9794 (RABAC1)
Uniprot/SPTREMBLF7AD44, F7AD44_HORSE

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