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E. caballus Gene: PSD - ENSECAG00000007172 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000007172
NamePSD
Descriptionpleckstrin and Sec7 domain containing [Source:HGNC Symbol;Acc:HGNC:9507]
OrganismEquus caballus (horse)
Synonym(s)efa6, efa6a, kiaa2011, psd1, tyl
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
816
  • 816
96.46
  • 96.46
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.18e3
  • 1.18e3
94.90
  • 94.90
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
4.31e3
  • 4.31e3
81.31
  • 81.31
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
4.71e3
  • 4.71e3
  • 4.90e3
79.57
  • 79.57
  • 78.78
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
6.66e3
  • 6.66e3
71.11
  • 71.11
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
8.54e3
  • 8.54e3
62.99
  • 62.99
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
8.91e3
  • 8.91e3
61.36
  • 61.36
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
  • 1.03e4
  • 1.17e4
  • 1.32e4
55.99
  • 55.99
  • 55.14
  • 49.08
  • 42.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.14e4
  • 1.14e4
50.53
  • 50.53
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
49.63
  • 49.63
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
  • 1.23e4
48.76
  • 48.76
  • 46.81
AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
48.36
  • 48.36
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
  • 1.28e4
45.96
  • 45.96
  • 44.66
AEIR
  • AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.25e4
  • 1.25e4
45.89
  • 45.89
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
41.50
  • 41.50
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
41.44
  • 41.44
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
41.15
  • 41.15
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
39.88
  • 39.88
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
39.06
  • 39.06
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
36.59
  • 36.59
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
35.80
  • 35.80
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression

Orthology information comes from OMA : ENSECAG00000007172.

Cross-references

EnsemblENSECAG00000007172 (PSD)
HGNCHGNC:9507 (PSD)
Uniprot/SPTREMBLF7BTT3, F7BTT3_HORSE

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