E. caballus Gene: DEPDC1B - ENSECAG00000007620 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000007620
NameDEPDC1B
DescriptionDEP domain containing 1B [Source:HGNC Symbol;Acc:HGNC:24902]
OrganismEquus caballus (horse)
Synonym(s)brcc3, xtp1
Orthologs(s)20 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
2.34e3
  • 2.34e3
89.86
  • 89.86
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
4.72e3
  • 4.72e3
79.55
  • 79.55
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
4.98e3
  • 4.98e3
78.41
  • 78.41
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
7.02e3
  • 7.02e3
  • 7.86e3
  • 8.03e3
  • 9.43e3
69.55
  • 69.55
  • 65.91
  • 65.18
  • 59.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
7.47e3
  • 7.47e3
67.63
  • 67.63
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
8.07e3
  • 8.07e3
  • 1.01e4
65.04
  • 65.04
  • 56.36
AEIR
  • AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
9.44e3
  • 9.44e3
59.09
  • 59.09
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
54.06
  • 54.06
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
46.37
  • 46.37
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
43.66
  • 43.66
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
43.49
  • 43.49
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
43.37
  • 43.37
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.40e4
  • 1.40e4
39.44
  • 39.44
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
36.15
  • 36.15
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.51e4
  • 1.51e4
  • 1.53e4
34.50
  • 34.50
  • 33.81
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.53e4
  • 1.53e4
33.50
  • 33.50
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.64e4
  • 1.64e4
29.03
  • 29.03
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.76e4
  • 1.76e4
23.60
  • 23.60
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species15 genesCompare expression
Mammalia15 species16 genesCompare expression
Amniota17 species18 genesCompare expression
Tetrapoda18 species19 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSECAG00000007620.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSECAG00000007620.

Cross-references

EnsemblENSECAG00000007620 (DEPDC1B)
HGNCHGNC:24902 (DEPDC1B)
Uniprot/SPTREMBLF7C309, F7C309_HORSE

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