E. caballus Gene: T - ENSECAG00000007994 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000007994
NameT
DescriptionT brachyury transcription factor [Source:HGNC Symbol;Acc:HGNC:11515]
OrganismEquus caballus (horse)
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.57e4
  • 1.57e4
31.82
  • 31.82
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
  • 1.96e4
30.12
  • 30.12
  • 15.16
AEIR
  • AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.70e4
  • 1.70e4
26.36
  • 26.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSECAG00000007994.

Cross-references

EnsemblENSECAG00000007994 (T)
HGNCHGNC:11515 (T)
Uniprot/SPTREMBLF6UF53, F6UF53_HORSE

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