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E. caballus Gene: TMEM198 - ENSECAG00000008352 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000008352
NameTMEM198
Descriptiontransmembrane protein 198 [Source:HGNC Symbol;Acc:HGNC:33704]
OrganismEquus caballus (horse)
Synonym(s)mgc99813, tmem198a
Orthologs(s)15 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
7.52e3
  • 7.52e3
  • 8.09e3
67.38
  • 67.38
  • 64.91
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
8.16e3
  • 8.16e3
64.61
  • 64.61
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.06e4
  • 1.06e4
  • 1.14e4
  • 1.15e4
  • 1.48e4
54.23
  • 54.23
  • 50.77
  • 50.32
  • 35.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.21e4
  • 1.21e4
47.73
  • 47.73
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
46.82
  • 46.82
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.34e4
  • 1.34e4
  • 1.42e4
41.90
  • 41.90
  • 38.24
AEIR
  • AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.43e4
  • 1.43e4
37.90
  • 37.90
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
37.37
  • 37.37
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
37.09
  • 37.09
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
36.20
  • 36.20
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.53e4
  • 1.53e4
33.84
  • 33.84
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
33.15
  • 33.15
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
32.34
  • 32.34
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression

Orthology information comes from OMA : ENSECAG00000008352.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSECAG00000008352.

Cross-references

EnsemblENSECAG00000008352 (TMEM198)
HGNCHGNC:33704 (TMEM198)
Uniprot/SPTREMBLF6U6R4, F6U6R4_HORSE

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