E. caballus Gene: HMGB1 - ENSECAG00000008439 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000008439
NameHMGB1
DescriptionEquus caballus high mobility group box 1 (HMGB1), mRNA [Source:RefSeq mRNA;Acc:NM_001081835]
OrganismEquus caballus (horse)
Synonym(s)hmg-1, hmg1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
398
  • 398
97.91935
  • 97.91935
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
547
  • 547
97.13573
  • 97.13573
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
855
  • 855
95.51854
  • 95.51854
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAB275457, JL616373
EnsemblENSECAG00000008439 (HMGB1)
Uniprot/SPTREMBLK9K2L5, K9K2L5_HORSE
Uniprot/SWISSPROTHMGB1_HORSE, Q08IE6

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