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E. caballus Gene: SNX7 - ENSECAG00000008507 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000008507
NameSNX7
Descriptionsorting nexin 7 [Source:HGNC Symbol;Acc:HGNC:14971]
OrganismEquus caballus (horse)
Orthologs(s)20 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.37e3
  • 1.37e3
94.08
  • 94.08
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.80e3
  • 1.80e3
92.19
  • 92.19
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
2.57e3
  • 2.57e3
88.84
  • 88.84
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
4.33e3
  • 4.33e3
  • 4.37e3
81.21
  • 81.21
  • 81.04
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
4.39e3
  • 4.39e3
  • 5.28e3
80.96
  • 80.96
  • 77.13
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
4.43e3
  • 4.43e3
80.80
  • 80.80
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
4.44e3
  • 4.44e3
  • 4.84e3
80.77
  • 80.77
  • 79.00
AEIR
  • AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
5.08e3
  • 5.08e3
77.98
  • 77.98
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
5.28e3
  • 5.28e3
  • 9.04e3
  • 1.08e4
  • 1.10e4
77.12
  • 77.12
  • 60.80
  • 53.34
  • 52.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
5.32e3
  • 5.32e3
76.93
  • 76.93
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
5.36e3
  • 5.36e3
76.75
  • 76.75
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
6.08e3
  • 6.08e3
73.62
  • 73.62
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
6.20e3
  • 6.20e3
73.11
  • 73.11
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
6.71e3
  • 6.71e3
70.92
  • 70.92
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
7.01e3
  • 7.01e3
69.62
  • 69.62
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
7.64e3
  • 7.64e3
66.89
  • 66.89
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
8.41e3
  • 8.41e3
63.55
  • 63.55
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
8.73e3
  • 8.73e3
62.14
  • 62.14
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.73e3
  • 8.73e3
62.13
  • 62.13
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
  • 1.19e4
49.25
  • 49.25
  • 48.21
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
48.48
  • 48.48
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
  • 1.28e4
47.54
  • 47.54
  • 44.39
AEIR
  • AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
1.34e4
  • 1.34e4
41.98
  • 41.98
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species14 genesCompare expression
Theria14 species15 genesCompare expression
Mammalia15 species16 genesCompare expression
Amniota17 species18 genesCompare expression
Tetrapoda18 species19 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSECAG00000008507.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSECAG00000008507.

Cross-references

EnsemblENSECAG00000008507 (SNX7)
HGNCHGNC:14971 (SNX7)
Uniprot/SPTREMBLF6UC95, F6UC95_HORSE

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