E. caballus Gene: DCHS1 - ENSECAG00000009296 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000009296
NameDCHS1
Descriptiondachsous cadherin-related 1 [Source:HGNC Symbol;Acc:HGNC:13681]
OrganismEquus caballus (horse)
Synonym(s)cdh25, cdhr6, fib1, flj11790, kiaa1773, pcdh16
Orthologs(s)19 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.43e3
  • 1.43e3
93.81
  • 93.81
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.72e3
  • 1.72e3
92.56
  • 92.56
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
2.56e3
  • 2.56e3
88.92
  • 88.92
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.81e3
  • 5.81e3
  • 6.52e3
74.81
  • 74.81
  • 71.72
AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
6.65e3
  • 6.65e3
71.18
  • 71.18
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
7.24e3
  • 7.24e3
  • 1.02e4
  • 1.03e4
  • 1.10e4
68.61
  • 68.61
  • 55.60
  • 55.29
  • 52.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
8.05e3
  • 8.05e3
  • 8.38e3
65.09
  • 65.09
  • 63.66
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
8.27e3
  • 8.27e3
64.13
  • 64.13
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
8.48e3
  • 8.48e3
63.23
  • 63.23
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
8.88e3
  • 8.88e3
61.52
  • 61.52
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
8.89e3
  • 8.89e3
61.45
  • 61.45
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
9.25e3
  • 9.25e3
59.88
  • 59.88
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
9.61e3
  • 9.61e3
58.32
  • 58.32
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.72e3
  • 9.72e3
  • 9.77e3
57.85
  • 57.85
  • 57.63
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
9.81e3
  • 9.81e3
57.48
  • 57.48
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.03e4
  • 1.03e4
  • 1.09e4
55.43
  • 55.43
  • 52.79
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
51.68
  • 51.68
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
51.40
  • 51.40
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
48.31
  • 48.31
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
43.53
  • 43.53
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.32e4
  • 1.32e4
42.98
  • 42.98
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
41.55
  • 41.55
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSECAG00000009296.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSECAG00000009296.

Cross-references

EnsemblENSECAG00000009296 (DCHS1)
HGNCHGNC:13681 (DCHS1)
Uniprot/SPTREMBLF6XB32, F6XB32_HORSE

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