E. caballus Gene: TDRD1 - ENSECAG00000009748 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000009748
NameTDRD1
Descriptiontudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
OrganismEquus caballus (horse)
Synonym(s)ct41.1
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.13e3
  • 2.13e3
  • 2.72e3
  • 4.58e3
  • 4.83e3
90.76
  • 90.76
  • 88.20
  • 80.17
  • 79.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
8.83e3
  • 8.83e3
61.70
  • 61.70
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.01e4
  • 1.01e4
56.02
  • 56.02
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
1.35e4
  • 1.35e4
41.37
  • 41.37
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.50e4
  • 1.50e4
34.93
  • 34.93
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.56e4
  • 1.56e4
32.31
  • 32.31
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.63e4
  • 1.63e4
29.31
  • 29.31
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.75e4
  • 1.75e4
23.92
  • 23.92
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSECAG00000009748.

Cross-references

EnsemblENSECAG00000009748 (TDRD1)
HGNCHGNC:11712 (TDRD1)
Uniprot/SPTREMBLF6PPZ2, F6PPZ2_HORSE

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