E. caballus Gene: TSFM - ENSECAG00000010520 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000010520
NameTSFM
DescriptionTs translation elongation factor, mitochondrial [Source:HGNC Symbol;Acc:HGNC:12367]
OrganismEquus caballus (horse)
Synonym(s)ef-ts, ef-tsmt
Orthologs(s)23 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.81e3
  • 1.81e3
  • 2.15e3
92.17
  • 92.17
  • 90.69
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.39e3
  • 2.39e3
  • 2.80e3
89.64
  • 89.64
  • 87.86
AEIR
  • AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
2.74e3
  • 2.74e3
88.12
  • 88.12
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
2.79e3
  • 2.79e3
87.90
  • 87.90
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
2.89e3
  • 2.89e3
87.48
  • 87.48
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
3.21e3
  • 3.21e3
86.09
  • 86.09
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
3.61e3
  • 3.61e3
84.36
  • 84.36
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
3.76e3
  • 3.76e3
83.70
  • 83.70
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
3.92e3
  • 3.92e3
83.02
  • 83.02
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
4.45e3
  • 4.45e3
80.70
  • 80.70
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
4.84e3
  • 4.84e3
79.03
  • 79.03
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.15e3
  • 5.15e3
  • 5.51e3
  • 6.73e3
  • 6.89e3
77.67
  • 77.67
  • 76.13
  • 70.81
  • 70.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.19e3
  • 5.19e3
  • 8.26e3
77.52
  • 77.52
  • 64.19
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
5.35e3
  • 5.35e3
76.80
  • 76.80
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
5.49e3
  • 5.49e3
76.22
  • 76.22
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
5.66e3
  • 5.66e3
75.48
  • 75.48
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
6.07e3
  • 6.07e3
  • 6.47e3
73.71
  • 73.71
  • 71.96
AEIR
  • AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
6.63e3
  • 6.63e3
71.25
  • 71.25
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
6.73e3
  • 6.73e3
70.84
  • 70.84
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
7.78e3
  • 7.78e3
  • 9.37e3
66.26
  • 66.26
  • 59.37
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.00e4
  • 1.00e4
56.47
  • 56.47
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.04e4
  • 1.04e4
54.98
  • 54.98
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
46.86
  • 46.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria3 species4 genesCompare expression
Boreoeutheria11 species12 genesCompare expression
Theria12 species13 genesCompare expression
Amniota13 species14 genesCompare expression
Tetrapoda14 species15 genesCompare expression
Euteleostomi15 species16 genesCompare expression
Bilateria22 species23 genesCompare expression

Orthology information comes from OMA : ENSECAG00000010520.

Cross-references

EnsemblENSECAG00000010520 (TSFM)
HGNCHGNC:12367 (TSFM)
Uniprot/SPTREMBLF6SMB0, F6SMB0_HORSE

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