E. caballus Gene: TIMP4 - ENSECAG00000011609 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000011609
NameTIMP4
DescriptionTIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:HGNC:11823]
OrganismEquus caballus (horse)
Orthologs(s)15 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
2.45e3
  • 2.45e3
  • 3.35e3
89.37
  • 89.37
  • 85.50
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.41e3
  • 4.41e3
  • 5.04e3
80.87
  • 80.87
  • 78.17
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
4.42e3
  • 4.42e3
  • 5.40e3
80.83
  • 80.83
  • 76.61
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
4.90e3
  • 4.90e3
78.75
  • 78.75
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
7.61e3
  • 7.61e3
67.00
  • 67.00
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
8.26e3
  • 8.26e3
64.18
  • 64.18
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
9.37e3
  • 9.37e3
59.36
  • 59.36
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
9.43e3
  • 9.43e3
  • 9.64e3
  • 1.31e4
  • 1.52e4
59.11
  • 59.11
  • 58.20
  • 43.31
  • 33.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
55.29
  • 55.29
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
51.76
  • 51.76
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
50.36
  • 50.36
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.15e4
  • 1.15e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
49.08
  • 49.08
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
47.67
  • 47.67
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.29e4
  • 1.29e4
  • 1.38e4
44.17
  • 44.17
  • 40.08
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
32.73
  • 32.73
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
30.21
  • 30.21
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
28.52
  • 28.52
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSECAG00000011609.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata2 genesCompare expression
Chordata3 genesCompare expression

Paralogy information comes from OMA : ENSECAG00000011609.

Cross-references

EnsemblENSECAG00000011609 (TIMP4)
HGNCHGNC:11823 (TIMP4)
Uniprot/SPTREMBLF7BMM7, F7BMM7_HORSE

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