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E. caballus Gene: SBSPON - ENSECAG00000011744 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000011744
NameSBSPON
Descriptionsomatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
OrganismEquus caballus (horse)
Synonym(s)c8orf84, rpesp
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.31e3
  • 1.31e3
94.33
  • 94.33
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.79e3
  • 1.79e3
92.23
  • 92.23
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
2.92e3
  • 2.92e3
87.36
  • 87.36
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
3.71e3
  • 3.71e3
83.93
  • 83.93
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
4.24e3
  • 4.24e3
81.63
  • 81.63
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
4.35e3
  • 4.35e3
81.13
  • 81.13
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
4.60e3
  • 4.60e3
80.04
  • 80.04
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
6.00e3
  • 6.00e3
74.01
  • 74.01
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
6.22e3
  • 6.22e3
  • 9.07e3
73.06
  • 73.06
  • 60.68
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
6.94e3
  • 6.94e3
69.91
  • 69.91
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
7.22e3
  • 7.22e3
  • 8.84e3
68.70
  • 68.70
  • 61.66
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
8.17e3
  • 8.17e3
64.59
  • 64.59
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.81e3
  • 9.81e3
57.46
  • 57.46
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
54.57
  • 54.57
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
50.83
  • 50.83
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
  • 1.52e4
43.36
  • 43.36
  • 34.01
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
  • 1.37e4
41.72
  • 41.72
  • 40.43
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
41.57
  • 41.57
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
41.08
  • 41.08
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.56e4
  • 1.56e4
  • 1.58e4
32.45
  • 32.45
  • 31.29
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.69e4
  • 1.69e4
26.67
  • 26.67
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSECAG00000011744.

Cross-references

EnsemblENSECAG00000011744 (SBSPON)
HGNCHGNC:30362 (SBSPON)
Uniprot/SPTREMBLF7AIW1, F7AIW1_HORSE

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