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E. caballus Gene: DDX52 - ENSECAG00000012286 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000012286
NameDDX52
DescriptionDEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Source:HGNC Symbol;Acc:HGNC:20038]
OrganismEquus caballus (horse)
Synonym(s)rok1
Orthologs(s)27 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
2.70e3
  • 2.70e3
88.32
  • 88.32
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
2.83e3
  • 2.83e3
87.73
  • 87.73
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
4.42e3
  • 4.42e3
80.85
  • 80.85
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
4.59e3
  • 4.59e3
80.11
  • 80.11
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.55e3
  • 5.55e3
  • 8.70e3
  • 9.73e3
  • 1.24e4
75.93
  • 75.93
  • 62.26
  • 57.81
  • 46.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
5.97e3
  • 5.97e3
  • 6.59e3
74.11
  • 74.11
  • 71.44
AEIR
  • AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
6.74e3
  • 6.74e3
70.77
  • 70.77
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
6.84e3
  • 6.84e3
  • 7.14e3
70.36
  • 70.36
  • 69.03
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
7.01e3
  • 7.01e3
  • 7.93e3
69.63
  • 69.63
  • 65.64
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.16e3
  • 7.16e3
  • 8.54e3
68.97
  • 68.97
  • 62.99
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
7.56e3
  • 7.56e3
67.23
  • 67.23
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
7.78e3
  • 7.78e3
66.27
  • 66.27
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
8.19e3
  • 8.19e3
64.50
  • 64.50
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
8.20e3
  • 8.20e3
64.44
  • 64.44
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
8.28e3
  • 8.28e3
64.09
  • 64.09
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
8.56e3
  • 8.56e3
62.91
  • 62.91
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.58e3
  • 8.58e3
62.80
  • 62.80
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
8.68e3
  • 8.68e3
  • 9.95e3
62.35
  • 62.35
  • 56.86
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
9.22e3
  • 9.22e3
60.02
  • 60.02
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
9.40e3
  • 9.40e3
59.25
  • 59.25
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
9.45e3
  • 9.45e3
59.01
  • 59.01
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
9.78e3
  • 9.78e3
57.59
  • 57.59
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
49.99
  • 49.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria5 species6 genesCompare expression
Boreoeutheria13 species14 genesCompare expression
Theria14 species15 genesCompare expression
Mammalia15 species16 genesCompare expression
Amniota17 species18 genesCompare expression
Tetrapoda18 species19 genesCompare expression
Euteleostomi19 species20 genesCompare expression
Bilateria26 species27 genesCompare expression

Orthology information comes from OMA : ENSECAG00000012286.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta1 geneCompare expression

Paralogy information comes from OMA : ENSECAG00000012286.

Cross-references

EnsemblENSECAG00000012286 (DDX52)
HGNCHGNC:20038 (DDX52)
Uniprot/SPTREMBLF6SGX9, F6SGX9_HORSE

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