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E. caballus Gene: - ENSECAG00000012298 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000012298
Name-
Description-
OrganismEquus caballus (horse)
Orthologs(s)43 orthologs
Paralog(s)8 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
7.26e3
  • 7.26e3
68.52
  • 68.52
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
7.50e3
  • 7.50e3
67.47
  • 67.47
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
7.55e3
  • 7.55e3
  • 8.22e3
67.27
  • 67.27
  • 64.36
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
7.95e3
  • 7.95e3
  • 8.31e3
65.53
  • 65.53
  • 63.98
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
8.09e3
  • 8.09e3
64.91
  • 64.91
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
8.29e3
  • 8.29e3
64.06
  • 64.06
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
8.38e3
  • 8.38e3
63.69
  • 63.69
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
8.69e3
  • 8.69e3
  • 9.22e3
  • 9.50e3
  • 1.23e4
62.31
  • 62.31
  • 60.01
  • 58.83
  • 46.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.84e3
  • 8.84e3
  • 9.20e3
61.67
  • 61.67
  • 60.12
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.02e3
  • 9.02e3
  • 9.68e3
60.91
  • 60.91
  • 58.04
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
9.06e3
  • 9.06e3
60.72
  • 60.72
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
9.22e3
  • 9.22e3
  • 9.96e3
60.03
  • 60.03
  • 56.84
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
9.57e3
  • 9.57e3
58.52
  • 58.52
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
9.68e3
  • 9.68e3
58.05
  • 58.05
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.98e3
  • 9.98e3
56.75
  • 56.75
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
55.39
  • 55.39
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.03e4
  • 1.03e4
55.23
  • 55.23
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
55.00
  • 55.00
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
54.77
  • 54.77
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
54.50
  • 54.50
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
52.91
  • 52.91
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
51.90
  • 51.90
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
51.73
  • 51.73
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
47.86
  • 47.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria5 species5 genesCompare expression
Tetrapoda6 species43 genesCompare expression

Orthology information comes from OMA : ENSECAG00000012298.

Paralogs (same species)

Paralogy information comes from OMA : ENSECAG00000012298.

Cross-references

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