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E. caballus Gene: COX6A1 - ENSECAG00000012512 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000012512
NameCOX6A1
Descriptioncytochrome c oxidase subunit VIa polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:2277]
OrganismEquus caballus (horse)
Synonym(s)cox6a
Orthologs(s)22 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
198
  • 198
  • 215
99.14
  • 99.14
  • 99.07
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
223
  • 223
99.04
  • 99.04
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
242
  • 242
98.96
  • 98.96
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
258
  • 258
98.89
  • 98.89
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
263
  • 263
98.86
  • 98.86
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
273
  • 273
  • 303
  • 528
  • 554
98.82
  • 98.82
  • 98.69
  • 97.72
  • 97.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
288
  • 288
98.76
  • 98.76
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
309
  • 309
98.66
  • 98.66
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
324
  • 324
98.60
  • 98.60
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
331
  • 331
  • 389
98.57
  • 98.57
  • 98.32
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
341
  • 341
98.53
  • 98.53
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
349
  • 349
98.49
  • 98.49
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
359
  • 359
  • 400
98.45
  • 98.45
  • 98.27
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
379
  • 379
98.36
  • 98.36
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
432
  • 432
98.13
  • 98.13
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
436
  • 436
98.11
  • 98.11
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
489
  • 489
97.88
  • 97.88
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
491
  • 491
97.88
  • 97.88
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
521
  • 521
97.75
  • 97.75
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
545
  • 545
97.64
  • 97.64
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
813
  • 813
96.48
  • 96.48
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.80e3
  • 1.80e3
92.18
  • 92.18
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.77e3
  • 2.77e3
  • 3.00e3
87.97
  • 87.97
  • 87.02
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.98e3
  • 2.98e3
  • 3.20e3
87.10
  • 87.10
  • 86.15
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species6 genesCompare expression
Boreoeutheria12 species17 genesCompare expression
Theria13 species18 genesCompare expression
Amniota15 species20 genesCompare expression
Tetrapoda16 species22 genesCompare expression

Orthology information comes from OMA : ENSECAG00000012512.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Sarcopterygii1 geneCompare expression

Paralogy information comes from OMA : ENSECAG00000012512.

Cross-references

EnsemblENSECAG00000012512 (COX6A1)
HGNCHGNC:2277 (COX6A1)
Uniprot/SPTREMBLF6RVC7, F6RVC7_HORSE

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