E. caballus Gene: BRAT1 - ENSECAG00000012635 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000012635
NameBRAT1
DescriptionBRCA1-associated ATM activator 1 [Source:HGNC Symbol;Acc:HGNC:21701]
OrganismEquus caballus (horse)
Synonym(s)baat1, c7orf27, mgc22916
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
6.11e3
  • 6.11e3
73.52
  • 73.52
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
6.87e3
  • 6.87e3
70.21
  • 70.21
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
7.57e3
  • 7.57e3
  • 8.06e3
67.16
  • 67.16
  • 65.07
AEIR
  • AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
7.80e3
  • 7.80e3
66.17
  • 66.17
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
8.11e3
  • 8.11e3
64.86
  • 64.86
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
8.78e3
  • 8.78e3
61.92
  • 61.92
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.93e3
  • 8.93e3
  • 9.57e3
  • 1.05e4
  • 1.05e4
61.27
  • 61.27
  • 58.52
  • 54.45
  • 54.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
9.09e3
  • 9.09e3
60.57
  • 60.57
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
9.16e3
  • 9.16e3
60.29
  • 60.29
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
9.50e3
  • 9.50e3
58.80
  • 58.80
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
9.88e3
  • 9.88e3
57.16
  • 57.16
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
9.95e3
  • 9.95e3
56.88
  • 56.88
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
  • 1.05e4
55.33
  • 55.33
  • 54.69
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.06e4
  • 1.06e4
  • 1.11e4
54.05
  • 54.05
  • 52.06
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
53.27
  • 53.27
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
52.52
  • 52.52
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
52.28
  • 52.28
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
  • 1.31e4
47.53
  • 47.53
  • 43.28
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
45.69
  • 45.69
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.30e4
  • 1.30e4
43.81
  • 43.81
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
1.50e4
  • 1.50e4
34.86
  • 34.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSECAG00000012635.

Cross-references

EnsemblENSECAG00000012635 (BRAT1)
HGNCHGNC:21701 (BRAT1)
Uniprot/SPTREMBLF6QD79, F6QD79_HORSE, F6QVM2, F6QVM2_HORSE

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