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E. caballus Gene: LANCL3 - ENSECAG00000013279 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000013279
NameLANCL3
DescriptionLanC lantibiotic synthetase component C-like 3 (bacterial) [Source:HGNC Symbol;Acc:HGNC:24767]
OrganismEquus caballus (horse)
Synonym(s)flj42925
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
47.45
  • 47.45
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
42.91
  • 42.91
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
  • 1.36e4
41.94
  • 41.94
  • 41.08
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.37e4
  • 1.37e4
  • 1.48e4
40.44
  • 40.44
  • 36.05
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
  • 1.44e4
37.83
  • 37.83
  • 37.65
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
34.87
  • 34.87
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.52e4
  • 1.52e4
34.13
  • 34.13
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
32.05
  • 32.05
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.66e4
  • 1.66e4
27.88
  • 27.88
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.81e4
  • 1.81e4
21.40
  • 21.40
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria2 species2 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Bilateria20 species20 genesCompare expression

Orthology information comes from OMA : ENSECAG00000013279.

Cross-references

EnsemblENSECAG00000013279 (LANCL3)
HGNCHGNC:24767 (LANCL3)
Uniprot/SPTREMBLF6ZVX4, F6ZVX4_HORSE

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