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E. caballus Gene: LMOD2 - ENSECAG00000015260 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000015260
NameLMOD2
Descriptionleiomodin 2 (cardiac) [Source:HGNC Symbol;Acc:HGNC:6648]
OrganismEquus caballus (horse)
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
234
  • 234
  • 393
98.99
  • 98.99
  • 98.30
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
476
  • 476
  • 506
97.94
  • 97.94
  • 97.81
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
505
  • 505
97.82
  • 97.82
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.27e4
  • 1.27e4
44.81
  • 44.81
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
34.77
  • 34.77
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
30.31
  • 30.31
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
29.48
  • 29.48
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.67e4
  • 1.67e4
27.70
  • 27.70
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.83e4
  • 1.83e4
20.47
  • 20.47
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
1.96e4
  • 1.96e4
14.83
  • 14.83
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species12 genesCompare expression
Theria12 species13 genesCompare expression
Mammalia13 species14 genesCompare expression
Amniota15 species16 genesCompare expression
Tetrapoda16 species17 genesCompare expression
Euteleostomi17 species18 genesCompare expression

Orthology information comes from OMA : ENSECAG00000015260.

Cross-references

EnsemblENSECAG00000015260 (LMOD2)
HGNCHGNC:6648 (LMOD2)
Uniprot/SPTREMBLF7DR55, F7DR55_HORSE

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