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E. caballus Gene: RYR1 - ENSECAG00000015344 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000015344
NameRYR1
Descriptionryanodine receptor 1 (skeletal) [Source:HGNC Symbol;Acc:HGNC:10483]
OrganismEquus caballus (horse)
Synonym(s)cco, mhs, mhs1, ppp1r137, ryr
Orthologs(s)20 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
662
  • 662
  • 664
97.13
  • 97.13
  • 97.13
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
664
  • 664
97.12
  • 97.12
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
772
  • 772
  • 1.04e3
96.66
  • 96.66
  • 95.48
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.95e3
  • 8.95e3
  • 1.12e4
61.19
  • 61.19
  • 51.47
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.15e4
  • 1.15e4
50.07
  • 50.07
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
47.14
  • 47.14
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.29e4
  • 1.29e4
44.10
  • 44.10
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
43.67
  • 43.67
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.32e4
  • 1.32e4
42.78
  • 42.78
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
  • 1.36e4
42.50
  • 42.50
  • 41.22
AEIR
  • AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
1.36e4
  • 1.36e4
41.22
  • 41.22
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
  • 1.64e4
  • 1.76e4
37.19
  • 37.19
  • 28.79
  • 23.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
35.00
  • 35.00
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
1.53e4
  • 1.53e4
33.65
  • 33.65
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria9 species9 genesCompare expression
Theria10 species10 genesCompare expression
Tetrapoda11 species11 genesCompare expression
Euteleostomi12 species13 genesCompare expression
Bilateria19 species20 genesCompare expression

Orthology information comes from OMA : ENSECAG00000015344.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSECAG00000015344.

Cross-references

EnsemblENSECAG00000015344 (RYR1)
HGNCHGNC:10483 (RYR1)
Uniprot/SPTREMBLF6VR21, F6VR21_HORSE

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