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E. caballus Gene: CDH6 - ENSECAG00000016111 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000016111
NameCDH6
Descriptioncadherin 6, type 2, K-cadherin (fetal kidney) [Source:HGNC Symbol;Acc:HGNC:1765]
OrganismEquus caballus (horse)
Orthologs(s)17 orthologs
Paralog(s)9 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
5.25e3
  • 5.25e3
77.26
  • 77.26
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
7.93e3
  • 7.93e3
65.61
  • 65.61
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.58e3
  • 8.58e3
62.81
  • 62.81
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
9.45e3
  • 9.45e3
59.05
  • 59.05
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
50.85
  • 50.85
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
  • 1.22e4
48.89
  • 48.89
  • 46.96
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
46.11
  • 46.11
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
1.26e4
  • 1.26e4
45.33
  • 45.33
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.27e4
  • 1.27e4
  • 1.31e4
44.96
  • 44.96
  • 43.11
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
44.44
  • 44.44
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
1.46e4
  • 1.46e4
36.75
  • 36.75
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
36.54
  • 36.54
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
36.37
  • 36.37
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
33.27
  • 33.27
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
32.69
  • 32.69
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.72e4
  • 1.72e4
  • 1.91e4
25.61
  • 25.61
  • 17.37
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression

Orthology information comes from OMA : ENSECAG00000016111.

Paralogs (same species)

Cross-references

EnsemblENSECAG00000016111 (CDH6)
HGNCHGNC:1765 (CDH6)
Uniprot/SPTREMBLF6X200, F6X200_HORSE

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