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E. caballus Gene: - ENSECAG00000016258 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000016258
Name-
Description-
OrganismEquus caballus (horse)
Orthologs(s)17 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
2.40e3
  • 2.40e3
89.58
  • 89.58
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
2.63e3
  • 2.63e3
  • 2.70e3
  • 4.23e3
  • 1.09e4
88.60
  • 88.60
  • 88.29
  • 81.68
  • 52.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
3.73e3
  • 3.73e3
83.83
  • 83.83
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.79e3
  • 5.79e3
  • 5.86e3
74.89
  • 74.89
  • 74.58
AEIR
  • AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
6.39e3
  • 6.39e3
72.28
  • 72.28
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
7.64e3
  • 7.64e3
  • 8.29e3
66.89
  • 66.89
  • 64.06
AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
8.17e3
  • 8.17e3
64.57
  • 64.57
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
8.26e3
  • 8.26e3
64.19
  • 64.19
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
8.60e3
  • 8.60e3
62.73
  • 62.73
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
8.65e3
  • 8.65e3
62.51
  • 62.51
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
9.30e3
  • 9.30e3
59.67
  • 59.67
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
9.39e3
  • 9.39e3
59.28
  • 59.28
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
  • 1.14e4
54.35
  • 54.35
  • 50.72
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.06e4
  • 1.06e4
  • 1.07e4
54.18
  • 54.18
  • 53.49
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
51.22
  • 51.22
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
49.12
  • 49.12
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
48.24
  • 48.24
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
48.08
  • 48.08
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
46.28
  • 46.28
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
  • 1.30e4
44.10
  • 44.10
  • 43.79
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.38e4
  • 1.38e4
40.23
  • 40.23
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.45e4
  • 1.45e4
37.27
  • 37.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species13 genesCompare expression
Amniota14 species15 genesCompare expression
Tetrapoda15 species16 genesCompare expression
Euteleostomi16 species17 genesCompare expression

Orthology information comes from OMA : ENSECAG00000016258.

Paralogs (same species)

Paralogy information comes from OMA : ENSECAG00000016258.

Cross-references

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