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E. caballus Gene: PCYT1A - ENSECAG00000017477 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000017477
NamePCYT1A
Descriptionphosphate cytidylyltransferase 1, choline, alpha [Source:HGNC Symbol;Acc:HGNC:8754]
OrganismEquus caballus (horse)
Synonym(s)ct, ctpct, pcyt1
Orthologs(s)17 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.52e3
  • 1.52e3
  • 1.83e3
  • 2.05e3
  • 8.56e3
93.43
  • 93.43
  • 92.08
  • 91.11
  • 62.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.69e3
  • 2.69e3
  • 3.13e3
88.34
  • 88.34
  • 86.44
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
2.87e3
  • 2.87e3
  • 3.30e3
87.55
  • 87.55
  • 85.71
AEIR
  • AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
3.05e3
  • 3.05e3
86.78
  • 86.78
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
3.42e3
  • 3.42e3
85.20
  • 85.20
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
3.48e3
  • 3.48e3
84.93
  • 84.93
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
3.62e3
  • 3.62e3
84.29
  • 84.29
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
3.97e3
  • 3.97e3
82.79
  • 82.79
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
4.02e3
  • 4.02e3
82.57
  • 82.57
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
4.35e3
  • 4.35e3
81.13
  • 81.13
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
4.41e3
  • 4.41e3
80.88
  • 80.88
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
4.45e3
  • 4.45e3
80.71
  • 80.71
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
4.50e3
  • 4.50e3
80.48
  • 80.48
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.16e3
  • 5.16e3
  • 5.26e3
77.64
  • 77.64
  • 77.20
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
5.32e3
  • 5.32e3
  • 5.47e3
76.92
  • 76.92
  • 76.30
AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
5.33e3
  • 5.33e3
76.88
  • 76.88
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
5.50e3
  • 5.50e3
76.17
  • 76.17
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
5.75e3
  • 5.75e3
75.09
  • 75.09
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
5.82e3
  • 5.82e3
74.78
  • 74.78
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
5.91e3
  • 5.91e3
74.36
  • 74.36
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
6.04e3
  • 6.04e3
73.81
  • 73.81
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
6.41e3
  • 6.41e3
  • 6.68e3
72.19
  • 72.19
  • 71.04
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.63e3
  • 7.63e3
66.94
  • 66.94
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species17 genesCompare expression

Orthology information comes from OMA : ENSECAG00000017477.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia1 geneCompare expression

Paralogy information comes from OMA : ENSECAG00000017477.

Cross-references

EnsemblENSECAG00000017477 (PCYT1A)
HGNCHGNC:8754 (PCYT1A)
Uniprot/SPTREMBLF6QMX1, F6QMX1_HORSE

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