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E. caballus Gene: LRRC59 - ENSECAG00000018072 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000018072
NameLRRC59
Descriptionleucine rich repeat containing 59 [Source:HGNC Symbol;Acc:HGNC:28817]
OrganismEquus caballus (horse)
Synonym(s)flj21675, pro1855
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
420
  • 420
98.18
  • 98.18
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
647
  • 647
97.20
  • 97.20
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.16e3
  • 1.16e3
94.96
  • 94.96
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.68e3
  • 1.68e3
92.72
  • 92.72
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.77e3
  • 1.77e3
92.33
  • 92.33
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
1.79e3
  • 1.79e3
  • 2.34e3
  • 2.54e3
  • 3.41e3
92.22
  • 92.22
  • 89.88
  • 89.00
  • 85.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.95e3
  • 1.95e3
91.56
  • 91.56
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
2.06e3
  • 2.06e3
91.06
  • 91.06
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
2.36e3
  • 2.36e3
89.77
  • 89.77
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
2.63e3
  • 2.63e3
88.59
  • 88.59
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
2.78e3
  • 2.78e3
  • 3.40e3
87.94
  • 87.94
  • 85.26
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
2.83e3
  • 2.83e3
87.72
  • 87.72
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
2.89e3
  • 2.89e3
87.49
  • 87.49
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.27e3
  • 3.27e3
85.81
  • 85.81
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
3.30e3
  • 3.30e3
85.70
  • 85.70
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
3.53e3
  • 3.53e3
84.70
  • 84.70
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
3.54e3
  • 3.54e3
84.64
  • 84.64
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.93e3
  • 3.93e3
  • 4.20e3
82.97
  • 82.97
  • 81.80
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
5.10e3
  • 5.10e3
77.89
  • 77.89
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
5.58e3
  • 5.58e3
75.79
  • 75.79
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.86e3
  • 5.86e3
  • 6.94e3
74.61
  • 74.61
  • 69.91
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.93e3
  • 5.93e3
  • 6.62e3
74.28
  • 74.28
  • 71.29
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.44e3
  • 6.44e3
  • 7.20e3
72.10
  • 72.10
  • 68.80
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSECAG00000018072.

Cross-references

EnsemblENSECAG00000018072 (LRRC59)
HGNCHGNC:28817 (LRRC59)
Uniprot/SPTREMBLF6QIV1, F6QIV1_HORSE

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