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E. caballus Gene: NUP43 - ENSECAG00000018413 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000018413
NameNUP43
Descriptionnucleoporin 43kDa [Source:HGNC Symbol;Acc:HGNC:21182]
OrganismEquus caballus (horse)
Synonym(s)ba350j20.1, flj13287
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
4.01e3
  • 4.01e3
82.61
  • 82.61
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
4.69e3
  • 4.69e3
79.67
  • 79.67
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
4.73e3
  • 4.73e3
79.49
  • 79.49
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.89e3
  • 5.89e3
  • 8.19e3
  • 8.96e3
  • 9.31e3
74.46
  • 74.46
  • 64.50
  • 61.15
  • 59.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
6.24e3
  • 6.24e3
  • 6.64e3
72.94
  • 72.94
  • 71.21
AEIR
  • AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
6.38e3
  • 6.38e3
72.34
  • 72.34
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
6.42e3
  • 6.42e3
  • 7.26e3
72.15
  • 72.15
  • 68.53
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.72e3
  • 6.72e3
  • 7.12e3
70.85
  • 70.85
  • 69.14
AEIR
  • AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
6.94e3
  • 6.94e3
69.90
  • 69.90
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
7.41e3
  • 7.41e3
67.89
  • 67.89
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
7.63e3
  • 7.63e3
  • 7.78e3
66.93
  • 66.93
  • 66.28
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
7.64e3
  • 7.64e3
66.89
  • 66.89
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
8.04e3
  • 8.04e3
65.15
  • 65.15
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
8.21e3
  • 8.21e3
64.42
  • 64.42
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
8.42e3
  • 8.42e3
63.48
  • 63.48
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
8.59e3
  • 8.59e3
  • 8.60e3
62.74
  • 62.74
  • 62.71
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
8.72e3
  • 8.72e3
62.20
  • 62.20
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
8.78e3
  • 8.78e3
61.93
  • 61.93
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
9.06e3
  • 9.06e3
60.74
  • 60.74
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
9.45e3
  • 9.45e3
59.02
  • 59.02
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
9.70e3
  • 9.70e3
57.93
  • 57.93
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
55.71
  • 55.71
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
54.16
  • 54.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species14 genesCompare expression
Mammalia14 species15 genesCompare expression
Amniota16 species17 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Euteleostomi18 species19 genesCompare expression
Bilateria24 species25 genesCompare expression

Orthology information comes from OMA : ENSECAG00000018413.

Cross-references

EnsemblENSECAG00000018413 (NUP43)
HGNCHGNC:21182 (NUP43)
Uniprot/SPTREMBLF7ABD6, F7ABD6_HORSE

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