Gene: HM13 - ENSECAG00000019217 - Equus caballus (horse)

General information

Ensembl ID	ENSECAG00000019217
Name	HM13
Description	histocompatibility (minor) 13 [Source:HGNC Symbol;Acc:HGNC:16435]
Organism	Equus caballus (horse)
Synonym(s)	dj324o17.1, h13, imp1, impas, psenl3, psl3, spp, sppl1

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000088	trophoblast	[+] 1 stage UBERON:0000068embryo stage	536 536	97.68140 97.68140	AEIR AEIR
UBERON:0010996	articular cartilage of joint	[+] 1 stage UBERON:0018241prime adult stage	595 595	97.42490 97.42490	AEIR AEIR
UBERON:0002018	synovial membrane of synovial joint	[+] 1 stage UBERON:0018241prime adult stage	692 692	97.00160 97.00160	AEIR AEIR
UBERON:0007106	chorionic villus	[+] 1 stage UBERON:0000113post-juvenile adult stage	738 738	96.80392 96.80392	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0018241prime adult stage	993 993	95.69723 95.69723	AEIR AEIR
UBERON:0000178	blood	[+] 2 stages UBERON:0000112sexually immature stage UBERON:0018241prime adult stage	1.23e3 1.23e3 1.57e3	94.66500 94.66500 93.18159	AEIR AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000104life cycle	1.30e3 1.30e3	94.36991 94.36991	AEIR AEIR
UBERON:0002371	bone marrow	[+] 1 stage UBERON:0018241prime adult stage	1.53e3 1.53e3	93.37255 93.37255	AEIR AEIR
UBERON:0001295	endometrium	[+] 1 stage UBERON:0018241prime adult stage	1.53e3 1.53e3	93.36440 93.36440	AEIR AEIR
UBERON:0002031	epithelium of bronchus	[+] 1 stage UBERON:0018241prime adult stage	1.55e3 1.55e3	93.27367 93.27367	AEIR AEIR
UBERON:0000473	testis	[+] 4 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	1.84e3 1.84e3 2.97e3 2.99e3 3.92e3	92.02442 92.02442 87.10361 87.04081 83.01245	AEIR AEIR AEIR AEIR AEIR
UBERON:0000082	adult mammalian kidney	[+] 1 stage UBERON:0018241prime adult stage	2.04e3 2.04e3	91.15084 91.15084	AEIR AEIR
UBERON:0004345	trophectoderm	[+] 1 stage UBERON:0000068embryo stage	2.66e3 2.66e3	88.48805 88.48805	AEIR AEIR
UBERON:0002037	cerebellum	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	3.07e3 3.07e3 3.23e3	86.70421 86.70421 86.00091	AEIR AEIR AEIR
UBERON:0000087	inner cell mass	[+] 1 stage UBERON:0000068embryo stage	3.18e3 3.18e3	86.23368 86.23368	AEIR AEIR
UBERON:0000451	prefrontal cortex	[+] 1 stage UBERON:0018241prime adult stage	3.20e3 3.20e3	86.10903 86.10903	AEIR AEIR
UBERON:0004804	oviduct epithelium	[+] 1 stage UBERON:0000113post-juvenile adult stage	3.41e3 3.41e3	85.21286 85.21286	AEIR AEIR
UBERON:0001509	triceps brachii	[+] 1 stage UBERON:0018241prime adult stage	4.08e3 4.08e3	82.32762 82.32762	AEIR AEIR
UBERON:0001371	gluteus medius	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	5.05e3 5.05e3 5.44e3	78.10773 78.10773 76.41835	AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 2 stages UBERON:0018241prime adult stage UBERON:0007222late adult stage	5.74e3 5.74e3 6.08e3	75.09359 75.09359 73.64358	AEIR AEIR AEIR
UBERON:0002240	spinal cord	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	5.76e3 5.76e3 5.77e3	75.03578 75.03578 74.98825	AEIR AEIR AEIR
UBERON:0002298	brainstem	[+] 1 stage UBERON:0000112sexually immature stage	6.43e3 6.43e3	72.10470 72.10470	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

Ensembl	ENSECAG00000019217 (HM13)
HGNC	HGNC:16435 (HM13)
Uniprot/SPTREMBL	F7DY53, F7DY53_HORSE, F7E2U5, F7E2U5_HORSE