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E. caballus Gene: ARID4A - ENSECAG00000019256 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000019256
NameARID4A
DescriptionAT-rich interaction domain 4A [Source:HGNC Symbol;Acc:HGNC:9885]
OrganismEquus caballus (horse)
Synonym(s)rbbp1, rbp-1, rbp1
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
3.50e3
  • 3.50e3
84.84
  • 84.84
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.60e3
  • 3.60e3
  • 4.09e3
84.39
  • 84.39
  • 82.25
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
4.54e3
  • 4.54e3
80.32
  • 80.32
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
4.59e3
  • 4.59e3
80.12
  • 80.12
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
4.70e3
  • 4.70e3
79.62
  • 79.62
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
5.65e3
  • 5.65e3
  • 5.93e3
75.50
  • 75.50
  • 74.31
AEIR
  • AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
5.71e3
  • 5.71e3
75.25
  • 75.25
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
5.92e3
  • 5.92e3
  • 6.21e3
74.33
  • 74.33
  • 73.09
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
6.27e3
  • 6.27e3
72.82
  • 72.82
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
6.67e3
  • 6.67e3
71.09
  • 71.09
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
6.92e3
  • 6.92e3
70.02
  • 70.02
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
6.99e3
  • 6.99e3
69.72
  • 69.72
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
7.28e3
  • 7.28e3
68.45
  • 68.45
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.32e3
  • 7.32e3
  • 7.52e3
68.29
  • 68.29
  • 67.38
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.38e3
  • 7.38e3
68.02
  • 68.02
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
7.75e3
  • 7.75e3
66.41
  • 66.41
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
7.96e3
  • 7.96e3
  • 8.13e3
65.50
  • 65.50
  • 64.75
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.62e3
  • 8.62e3
62.63
  • 62.63
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.77e3
  • 8.77e3
  • 9.37e3
  • 1.01e4
  • 1.30e4
61.99
  • 61.99
  • 59.40
  • 56.18
  • 43.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
8.84e3
  • 8.84e3
61.69
  • 61.69
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
9.49e3
  • 9.49e3
58.86
  • 58.86
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
55.79
  • 55.79
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
54.73
  • 54.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSECAG00000019256.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSECAG00000019256.

Cross-references

EnsemblENSECAG00000019256 (ARID4A)
HGNCHGNC:9885 (ARID4A)
Uniprot/SPTREMBLF7DEK4, F7DEK4_HORSE

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