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E. caballus Gene: GDF5 - ENSECAG00000019421 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000019421
NameGDF5
Descriptiongrowth differentiation factor 5 [Source:HGNC Symbol;Acc:HGNC:4220]
OrganismEquus caballus (horse)
Synonym(s)bmp14, cdmp1
Orthologs(s)16 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
4.22e3
  • 4.22e3
81.70
  • 81.70
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.05e4
  • 1.05e4
54.30
  • 54.30
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
46.66
  • 46.66
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
  • 1.97e4
43.96
  • 43.96
  • 14.41
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
34.66
  • 34.66
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.69e4
  • 1.69e4
26.79
  • 26.79
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.81e4
  • 1.81e4
21.62
  • 21.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSECAG00000019421.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSECAG00000019421.

Cross-references

EnsemblENSECAG00000019421 (GDF5)
HGNCHGNC:4220 (GDF5)
Uniprot/SPTREMBLF7BKJ7, F7BKJ7_HORSE

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