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E. caballus Gene: NIPAL1 - ENSECAG00000019455 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000019455
NameNIPAL1
DescriptionNIPA-like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:27194]
OrganismEquus caballus (horse)
Synonym(s)dkfzp686a06115, npal1
Orthologs(s)23 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
4.98e3
  • 4.98e3
78.39
  • 78.39
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
5.67e3
  • 5.67e3
75.41
  • 75.41
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
6.28e3
  • 6.28e3
72.79
  • 72.79
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
7.09e3
  • 7.09e3
69.27
  • 69.27
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
7.86e3
  • 7.86e3
65.95
  • 65.95
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
8.48e3
  • 8.48e3
63.25
  • 63.25
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
9.38e3
  • 9.38e3
  • 9.64e3
59.33
  • 59.33
  • 58.22
AEIR
  • AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
1.00e4
  • 1.00e4
56.60
  • 56.60
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
56.05
  • 56.05
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
53.60
  • 53.60
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
51.30
  • 51.30
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
48.93
  • 48.93
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
46.23
  • 46.23
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
44.86
  • 44.86
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
1.35e4
  • 1.35e4
41.69
  • 41.69
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
40.92
  • 40.92
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
  • 1.49e4
37.92
  • 37.92
  • 35.26
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
  • 1.75e4
36.20
  • 36.20
  • 24.00
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.51e4
  • 1.51e4
34.43
  • 34.43
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.69e4
  • 1.69e4
26.76
  • 26.76
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSECAG00000019455.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression
Eukaryota4 genesCompare expression

Paralogy information comes from OMA : ENSECAG00000019455.

Cross-references

EnsemblENSECAG00000019455 (NIPAL1)
HGNCHGNC:27194 (NIPAL1)
Uniprot/SPTREMBLF7DYY7, F7DYY7_HORSE

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