Gene: YTHDF1 - ENSECAG00000019475 - Equus caballus (horse)

General information

Ensembl ID	ENSECAG00000019475
Name	YTHDF1
Description	YTH N(6)-methyladenosine RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:15867]
Organism	Equus caballus (horse)
Synonym(s)	c20orf21, flj20391

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0010996	articular cartilage of joint	[+] 1 stage UBERON:0018241prime adult stage	3.11e3 3.11e3	86.52175 86.52175	AEIR AEIR
UBERON:0007106	chorionic villus	[+] 1 stage UBERON:0000113post-juvenile adult stage	3.47e3 3.47e3	84.97567 84.97567	AEIR AEIR
UBERON:0000922	embryo	[+] 1 stage UBERON:0000068embryo stage	3.51e3 3.51e3	84.77421 84.77421	AEIR AEIR
UBERON:0000087	inner cell mass	[+] 1 stage UBERON:0000068embryo stage	3.67e3 3.67e3	84.10782 84.10782	AEIR AEIR
UBERON:0004345	trophectoderm	[+] 1 stage UBERON:0000068embryo stage	3.87e3 3.87e3	83.21568 83.21568	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 2 stages UBERON:0018241prime adult stage UBERON:0007222late adult stage	4.03e3 4.03e3 4.16e3	82.51433 82.51433 81.97511	AEIR AEIR AEIR
UBERON:0000088	trophoblast	[+] 1 stage UBERON:0000068embryo stage	4.03e3 4.03e3	82.51073 82.51073	AEIR AEIR
UBERON:0002018	synovial membrane of synovial joint	[+] 1 stage UBERON:0018241prime adult stage	4.08e3 4.08e3	82.29969 82.29969	AEIR AEIR
UBERON:0001509	triceps brachii	[+] 1 stage UBERON:0018241prime adult stage	4.10e3 4.10e3	82.23676 82.23676	AEIR AEIR
UBERON:0000473	testis	[+] 4 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	4.10e3 4.10e3 4.67e3 5.36e3 6.63e3	82.23667 82.23667 79.75027 76.74459 71.27016	AEIR AEIR AEIR AEIR AEIR
UBERON:0001371	gluteus medius	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	4.43e3 4.43e3 4.52e3	80.81168 80.81168 80.38461	AEIR AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0018241prime adult stage	4.61e3 4.61e3	80.02021 80.02021	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000104life cycle	5.16e3 5.16e3	77.64427 77.64427	AEIR AEIR
UBERON:0000178	blood	[+] 2 stages UBERON:0000112sexually immature stage UBERON:0018241prime adult stage	5.58e3 5.58e3 5.79e3	75.80795 75.80795 74.90012	AEIR AEIR AEIR
UBERON:0000082	adult mammalian kidney	[+] 1 stage UBERON:0018241prime adult stage	6.04e3 6.04e3	73.80817 73.80817	AEIR AEIR
UBERON:0001295	endometrium	[+] 1 stage UBERON:0018241prime adult stage	6.18e3 6.18e3	73.18021 73.18021	AEIR AEIR
UBERON:0000451	prefrontal cortex	[+] 1 stage UBERON:0018241prime adult stage	6.29e3 6.29e3	72.73678 72.73678	AEIR AEIR
UBERON:0002037	cerebellum	[+] 2 stages UBERON:0000112sexually immature stage UBERON:0018241prime adult stage	6.31e3 6.31e3 6.64e3	72.61621 72.61621 71.19582	AEIR AEIR AEIR
UBERON:0002031	epithelium of bronchus	[+] 1 stage UBERON:0018241prime adult stage	6.61e3 6.61e3	71.32814 71.32814	AEIR AEIR
UBERON:0002371	bone marrow	[+] 1 stage UBERON:0018241prime adult stage	7.67e3 7.67e3	66.71839 66.71839	AEIR AEIR
UBERON:0004804	oviduct epithelium	[+] 1 stage UBERON:0000113post-juvenile adult stage	7.78e3 7.78e3	66.27120 66.27120	AEIR AEIR
UBERON:0002240	spinal cord	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	8.19e3 8.19e3 8.57e3	64.50536 64.50536 62.83957	AEIR AEIR AEIR
UBERON:0002298	brainstem	[+] 1 stage UBERON:0000112sexually immature stage	8.21e3 8.21e3	64.37936 64.37936	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

Ensembl	ENSECAG00000019475 (YTHDF1)
HGNC	HGNC:15867 (YTHDF1)
Uniprot/SPTREMBL	F7BVQ8, F7BVQ8_HORSE