E. caballus Gene: SFT2D1 - ENSECAG00000019479 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000019479
NameSFT2D1
DescriptionSFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
OrganismEquus caballus (horse)
Synonym(s)c6orf83, mgc19825, prgr1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
934
  • 934
95.95502
  • 95.95502
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
975
  • 975
  • 1.60e3
95.77681
  • 95.77681
  • 93.06358
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.14e3
  • 1.14e3
  • 1.26e3
95.06441
  • 95.06441
  • 94.53628
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.94e3
  • 1.94e3
91.60320
  • 91.60320
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
2.15e3
  • 2.15e3
90.69549
  • 90.69549
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
2.18e3
  • 2.18e3
  • 3.64e3
  • 3.84e3
  • 3.86e3
90.54157
  • 90.54157
  • 84.23472
  • 83.34558
  • 83.27818
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
2.19e3
  • 2.19e3
90.51021
  • 90.51021
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
2.26e3
  • 2.26e3
90.20501
  • 90.20501
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
2.27e3
  • 2.27e3
90.16637
  • 90.16637
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
2.62e3
  • 2.62e3
88.64419
  • 88.64419
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
2.77e3
  • 2.77e3
87.97745
  • 87.97745
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
3.05e3
  • 3.05e3
86.75639
  • 86.75639
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.34e3
  • 3.34e3
85.53368
  • 85.53368
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.47e3
  • 3.47e3
  • 3.94e3
84.95433
  • 84.95433
  • 82.89942
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
3.82e3
  • 3.82e3
83.42273
  • 83.42273
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.83e3
  • 3.83e3
  • 4.42e3
83.39333
  • 83.39333
  • 80.84603
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
4.01e3
  • 4.01e3
  • 4.59e3
82.63248
  • 82.63248
  • 80.08167
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
5.01e3
  • 5.01e3
78.26088
  • 78.26088
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
5.17e3
  • 5.17e3
77.59908
  • 77.59908
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
5.31e3
  • 5.31e3
76.96240
  • 76.96240
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
6.96e3
  • 6.96e3
69.80128
  • 69.80128
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
7.10e3
  • 7.10e3
69.21664
  • 69.21664
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000019479 (SFT2D1)
HGNCHGNC:21102 (SFT2D1)
Uniprot/SPTREMBLF6V6D6, F6V6D6_HORSE

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