E. caballus Gene: TRAPPC2L - ENSECAG00000019657 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000019657
NameTRAPPC2L
Descriptiontrafficking protein particle complex 2-like [Source:HGNC Symbol;Acc:HGNC:30887]
OrganismEquus caballus (horse)
Synonym(s)hspc176

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
729
  • 729
  • 903
  • 976
  • 1.43e3
96.84070
  • 96.84070
  • 96.08791
  • 95.77135
  • 93.81060
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.27e3
  • 1.27e3
94.49408
  • 94.49408
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.43e3
  • 1.43e3
  • 1.81e3
93.80709
  • 93.80709
  • 92.13827
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.45e3
  • 1.45e3
  • 1.70e3
93.69792
  • 93.69792
  • 92.64432
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.68e3
  • 1.68e3
  • 2.11e3
92.71995
  • 92.71995
  • 90.84768
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.98e3
  • 1.98e3
  • 2.80e3
91.40825
  • 91.40825
  • 87.85800
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
2.29e3
  • 2.29e3
90.05456
  • 90.05456
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.34e3
  • 2.34e3
89.86837
  • 89.86837
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
2.41e3
  • 2.41e3
89.54226
  • 89.54226
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
2.94e3
  • 2.94e3
87.25016
  • 87.25016
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.95e3
  • 2.95e3
  • 3.57e3
87.22444
  • 87.22444
  • 84.50458
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
3.00e3
  • 3.00e3
86.98374
  • 86.98374
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
3.06e3
  • 3.06e3
86.73622
  • 86.73622
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
3.10e3
  • 3.10e3
86.55961
  • 86.55961
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
3.12e3
  • 3.12e3
86.46424
  • 86.46424
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
3.20e3
  • 3.20e3
86.11021
  • 86.11021
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
3.30e3
  • 3.30e3
85.69914
  • 85.69914
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
3.34e3
  • 3.34e3
85.51715
  • 85.51715
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
3.77e3
  • 3.77e3
83.65234
  • 83.65234
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
4.07e3
  • 4.07e3
82.33274
  • 82.33274
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
4.94e3
  • 4.94e3
78.55757
  • 78.55757
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
8.02e3
  • 8.02e3
65.22254
  • 65.22254
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000019657 (TRAPPC2L)
HGNCHGNC:30887 (TRAPPC2L)
Uniprot/SPTREMBLF7D905, F7D905_HORSE

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