Gene: TRAPPC2L - ENSECAG00000019657 - Equus caballus (horse)

General information

Ensembl ID	ENSECAG00000019657
Name	TRAPPC2L
Description	trafficking protein particle complex 2-like [Source:HGNC Symbol;Acc:HGNC:30887]
Organism	Equus caballus (horse)
Synonym(s)	hspc176

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000473	testis	[+] 4 stages UBERON:0000113post-juvenile adult stage UBERON:0018241prime adult stage UBERON:0000104life cycle UBERON:0000112sexually immature stage	729 729 903 976 1.43e3	96.84070 96.84070 96.08791 95.77135 93.81060	AEIR AEIR AEIR AEIR AEIR
UBERON:0001509	triceps brachii	[+] 1 stage UBERON:0018241prime adult stage	1.27e3 1.27e3	94.49408 94.49408	AEIR AEIR
UBERON:0001371	gluteus medius	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	1.43e3 1.43e3 1.81e3	93.80709 93.80709 92.13827	AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 2 stages UBERON:0018241prime adult stage UBERON:0007222late adult stage	1.45e3 1.45e3 1.70e3	93.69792 93.69792 92.64432	AEIR AEIR AEIR
UBERON:0002037	cerebellum	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	1.68e3 1.68e3 2.11e3	92.71995 92.71995 90.84768	AEIR AEIR AEIR
UBERON:0002240	spinal cord	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	1.98e3 1.98e3 2.80e3	91.40825 91.40825 87.85800	AEIR AEIR AEIR
UBERON:0004804	oviduct epithelium	[+] 1 stage UBERON:0000113post-juvenile adult stage	2.29e3 2.29e3	90.05456 90.05456	AEIR AEIR
UBERON:0000451	prefrontal cortex	[+] 1 stage UBERON:0018241prime adult stage	2.34e3 2.34e3	89.86837 89.86837	AEIR AEIR
UBERON:0001295	endometrium	[+] 1 stage UBERON:0018241prime adult stage	2.41e3 2.41e3	89.54226 89.54226	AEIR AEIR
UBERON:0004345	trophectoderm	[+] 1 stage UBERON:0000068embryo stage	2.94e3 2.94e3	87.25016 87.25016	AEIR AEIR
UBERON:0000178	blood	[+] 2 stages UBERON:0018241prime adult stage UBERON:0000112sexually immature stage	2.95e3 2.95e3 3.57e3	87.22444 87.22444 84.50458	AEIR AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0018241prime adult stage	3.00e3 3.00e3	86.98374 86.98374	AEIR AEIR
UBERON:0002031	epithelium of bronchus	[+] 1 stage UBERON:0018241prime adult stage	3.06e3 3.06e3	86.73622 86.73622	AEIR AEIR
UBERON:0010996	articular cartilage of joint	[+] 1 stage UBERON:0018241prime adult stage	3.10e3 3.10e3	86.55961 86.55961	AEIR AEIR
UBERON:0000082	adult mammalian kidney	[+] 1 stage UBERON:0018241prime adult stage	3.12e3 3.12e3	86.46424 86.46424	AEIR AEIR
UBERON:0007106	chorionic villus	[+] 1 stage UBERON:0000113post-juvenile adult stage	3.20e3 3.20e3	86.11021 86.11021	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000104life cycle	3.30e3 3.30e3	85.69914 85.69914	AEIR AEIR
UBERON:0000087	inner cell mass	[+] 1 stage UBERON:0000068embryo stage	3.34e3 3.34e3	85.51715 85.51715	AEIR AEIR
UBERON:0002371	bone marrow	[+] 1 stage UBERON:0018241prime adult stage	3.77e3 3.77e3	83.65234 83.65234	AEIR AEIR
UBERON:0002018	synovial membrane of synovial joint	[+] 1 stage UBERON:0018241prime adult stage	4.07e3 4.07e3	82.33274 82.33274	AEIR AEIR
UBERON:0000088	trophoblast	[+] 1 stage UBERON:0000068embryo stage	4.94e3 4.94e3	78.55757 78.55757	AEIR AEIR
UBERON:0002298	brainstem	[+] 1 stage UBERON:0000112sexually immature stage	8.02e3 8.02e3	65.22254 65.22254	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

Ensembl	ENSECAG00000019657 (TRAPPC2L)
HGNC	HGNC:30887 (TRAPPC2L)
Uniprot/SPTREMBL	F7D905, F7D905_HORSE