E. caballus Gene: CCDC88C - ENSECAG00000019716 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000019716
NameCCDC88C
Descriptioncoiled-coil domain containing 88C [Source:HGNC Symbol;Acc:HGNC:19967]
OrganismEquus caballus (horse)
Synonym(s)daple, hkrp2, kiaa1509, sca40

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
2.24e3
  • 2.24e3
90.28664
  • 90.28664
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.96e3
  • 2.96e3
  • 3.38e3
87.17262
  • 87.17262
  • 85.33634
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
3.18e3
  • 3.18e3
  • 3.32e3
86.22670
  • 86.22670
  • 85.62107
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
4.10e3
  • 4.10e3
82.21672
  • 82.21672
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
5.48e3
  • 5.48e3
76.24982
  • 76.24982
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
5.61e3
  • 5.61e3
75.65238
  • 75.65238
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
6.97e3
  • 6.97e3
  • 7.50e3
69.75374
  • 69.75374
  • 67.46346
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
7.71e3
  • 7.71e3
66.55645
  • 66.55645
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
7.83e3
  • 7.83e3
66.05291
  • 66.05291
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
8.18e3
  • 8.18e3
  • 9.60e3
  • 1.13e4
  • 1.16e4
64.51963
  • 64.51963
  • 58.38184
  • 51.14282
  • 49.51238
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
8.59e3
  • 8.59e3
62.73678
  • 62.73678
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.92e3
  • 8.92e3
61.32511
  • 61.32511
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
8.94e3
  • 8.94e3
61.20957
  • 61.20957
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
9.03e3
  • 9.03e3
60.86204
  • 60.86204
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
9.92e3
  • 9.92e3
56.96149
  • 56.96149
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.01e4
  • 1.01e4
56.24834
  • 56.24834
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
52.40161
  • 52.40161
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.11e4
  • 1.11e4
51.70772
  • 51.70772
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
51.21993
  • 51.21993
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.32e4
  • 1.32e4
  • 1.36e4
42.86095
  • 42.86095
  • 41.10348
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
  • 1.35e4
41.45192
  • 41.45192
  • 41.33235
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000019716 (CCDC88C)
HGNCHGNC:19967 (CCDC88C)
Uniprot/SPTREMBLF7CG30, F7CG30_HORSE

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