E. caballus Gene: GTF2IRD1 - ENSECAG00000019745 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000019745
NameGTF2IRD1
DescriptionGTF2I repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:4661]
OrganismEquus caballus (horse)
Synonym(s)ben, cream1, gtf3, mustrd1, rbap2, wbscr11, wbscr12

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
5.99e3
  • 5.99e3
74.03739
  • 74.03739
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
7.53e3
  • 7.53e3
67.34137
  • 67.34137
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
7.85e3
  • 7.85e3
65.95090
  • 65.95090
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.09e3
  • 8.09e3
  • 9.28e3
64.91035
  • 64.91035
  • 59.75994
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.48e3
  • 8.48e3
  • 1.13e4
  • 1.25e4
  • 1.37e4
63.24600
  • 63.24600
  • 51.19751
  • 45.98603
  • 40.68647
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
8.68e3
  • 8.68e3
62.35915
  • 62.35915
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
8.77e3
  • 8.77e3
61.98105
  • 61.98105
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
9.18e3
  • 9.18e3
  • 9.26e3
60.18827
  • 60.18827
  • 59.84733
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
9.32e3
  • 9.32e3
59.59925
  • 59.59925
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
9.71e3
  • 9.71e3
57.90988
  • 57.90988
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.82e3
  • 9.82e3
  • 1.04e4
57.42499
  • 57.42499
  • 54.78319
AEIR
  • AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
9.85e3
  • 9.85e3
57.28959
  • 57.28959
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.05e4
  • 1.05e4
54.39077
  • 54.39077
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
52.58208
  • 52.58208
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
51.61868
  • 51.61868
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.14e4
  • 1.14e4
50.64848
  • 50.64848
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.14e4
  • 1.14e4
50.42469
  • 50.42469
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
49.72663
  • 49.72663
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
  • 1.30e4
44.63408
  • 44.63408
  • 43.52691
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
43.63243
  • 43.63243
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
36.18858
  • 36.18858
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000019745 (GTF2IRD1)
HGNCHGNC:4661 (GTF2IRD1)
Uniprot/SPTREMBLF7C947, F7C947_HORSE, F7CPH2, F7CPH2_HORSE

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