E. caballus Gene: ARCN1 - ENSECAG00000019849 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000019849
NameARCN1
Descriptionarchain 1 [Source:HGNC Symbol;Acc:HGNC:649]
OrganismEquus caballus (horse)
Synonym(s)copd

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
602
  • 602
97.39
  • 97.39
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
720
  • 720
96.88
  • 96.88
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
741
  • 741
96.79
  • 96.79
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
855
  • 855
96.30
  • 96.30
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
984
  • 984
95.74
  • 95.74
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.05e3
  • 1.05e3
95.45
  • 95.45
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.11e3
  • 1.11e3
  • 1.18e3
95.19
  • 95.19
  • 94.89
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
1.14e3
  • 1.14e3
  • 1.36e3
  • 1.62e3
  • 1.90e3
95.06
  • 95.06
  • 94.13
  • 92.96
  • 91.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.16e3
  • 1.16e3
94.97
  • 94.97
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.20e3
  • 1.20e3
94.82
  • 94.82
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.21e3
  • 1.21e3
94.75
  • 94.75
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.38e3
  • 1.38e3
  • 2.27e3
94.04
  • 94.04
  • 90.17
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.46e3
  • 1.46e3
93.69
  • 93.69
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.46e3
  • 1.46e3
  • 1.80e3
93.67
  • 93.67
  • 92.21
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.49e3
  • 1.49e3
  • 3.43e3
93.55
  • 93.55
  • 85.14
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.49e3
  • 1.49e3
93.54
  • 93.54
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.68e3
  • 1.68e3
92.72
  • 92.72
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.86e3
  • 1.86e3
  • 2.15e3
91.95
  • 91.95
  • 90.69
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.93e3
  • 1.93e3
91.64
  • 91.64
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
2.28e3
  • 2.28e3
90.12
  • 90.12
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.48e3
  • 2.48e3
89.23
  • 89.23
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
2.63e3
  • 2.63e3
88.60
  • 88.60
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000019849 (ARCN1)
HGNCHGNC:649 (ARCN1)
Uniprot/SPTREMBLF7CR22, F7CR22_HORSE

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