E. caballus Gene: VAX2 - ENSECAG00000019854 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000019854
NameVAX2
Descriptionventral anterior homeobox 2 [Source:HGNC Symbol;Acc:HGNC:12661]
OrganismEquus caballus (horse)
Synonym(s)dres93
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
54.61
  • 54.61
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
50.50
  • 50.50
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
49.55
  • 49.55
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
48.44
  • 48.44
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
46.98
  • 46.98
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.29e4
  • 1.29e4
43.90
  • 43.90
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
38.69
  • 38.69
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
38.37
  • 38.37
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
37.94
  • 37.94
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
35.99
  • 35.99
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
34.10
  • 34.10
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.59e4
  • 1.59e4
31.15
  • 31.15
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.63e4
  • 1.63e4
29.48
  • 29.48
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.63e4
  • 1.63e4
29.33
  • 29.33
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.64e4
  • 1.64e4
  • 2.27e4
29.06
  • 29.06
  • 1.47
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
1.73e4
  • 1.73e4
25.01
  • 25.01
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.81e4
  • 1.81e4
21.61
  • 21.61
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.84e4
  • 1.84e4
20.26
  • 20.26
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSECAG00000019854.

Cross-references

EnsemblENSECAG00000019854 (VAX2)
HGNCHGNC:12661 (VAX2)
Uniprot/SPTREMBLF7CC20, F7CC20_HORSE

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