E. caballus Gene: VAX2 - ENSECAG00000019854 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000019854
NameVAX2
Descriptionventral anterior homeobox 2 [Source:HGNC Symbol;Acc:HGNC:12661]
OrganismEquus caballus (horse)
Synonym(s)dres93

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
54.59557
  • 54.59557
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
49.53415
  • 49.53415
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
48.42343
  • 48.42343
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
46.96227
  • 46.96227
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.29e4
  • 1.29e4
43.88923
  • 43.88923
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
38.67867
  • 38.67867
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
37.92328
  • 37.92328
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
36.27324
  • 36.27324
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
35.97042
  • 35.97042
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
34.08943
  • 34.08943
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.59e4
  • 1.59e4
31.14030
  • 31.14030
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.63e4
  • 1.63e4
29.45873
  • 29.45873
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.63e4
  • 1.63e4
29.31656
  • 29.31656
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.64e4
  • 1.64e4
  • 2.27e4
29.04138
  • 29.04138
  • 1.47244
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
1.73e4
  • 1.73e4
25.00048
  • 25.00048
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.81e4
  • 1.81e4
21.60173
  • 21.60173
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.84e4
  • 1.84e4
20.25610
  • 20.25610
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000019854 (VAX2)
HGNCHGNC:12661 (VAX2)
Uniprot/SPTREMBLF7CC20, F7CC20_HORSE

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