E. caballus Gene: PDLIM2 - ENSECAG00000019910 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000019910
NamePDLIM2
DescriptionPDZ and LIM domain 2 (mystique) [Source:HGNC Symbol;Acc:HGNC:13992]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.19e3
  • 1.19e3
  • 1.36e3
94.86343
  • 94.86343
  • 94.10032
AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
2.30e3
  • 2.30e3
90.04940
  • 90.04940
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
2.34e3
  • 2.34e3
89.83701
  • 89.83701
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
3.26e3
  • 3.26e3
85.85076
  • 85.85076
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
4.06e3
  • 4.06e3
82.37962
  • 82.37962
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
4.15e3
  • 4.15e3
82.00169
  • 82.00169
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
5.50e3
  • 5.50e3
76.15123
  • 76.15123
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
5.57e3
  • 5.57e3
75.86520
  • 75.86520
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
6.06e3
  • 6.06e3
73.72290
  • 73.72290
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
7.00e3
  • 7.00e3
69.66175
  • 69.66175
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.30e3
  • 7.30e3
  • 9.15e3
  • 1.26e4
  • 1.28e4
68.33491
  • 68.33491
  • 60.32376
  • 45.44824
  • 44.44503
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
8.78e3
  • 8.78e3
61.93429
  • 61.93429
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
  • 1.08e4
56.28586
  • 56.28586
  • 53.03188
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
53.48276
  • 53.48276
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.11e4
  • 1.11e4
  • 1.14e4
51.71514
  • 51.71514
  • 50.57900
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.28e4
  • 1.28e4
  • 1.41e4
44.41601
  • 44.41601
  • 38.82877
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.28e4
  • 1.28e4
  • 1.33e4
44.32246
  • 44.32246
  • 42.25749
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
43.78831
  • 43.78831
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
37.51459
  • 37.51459
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000019910 (PDLIM2)
HGNCHGNC:13992 (PDLIM2)
Uniprot/SPTREMBLF7D884, F7D884_HORSE, F7DD74, F7DD74_HORSE

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