E. caballus Gene: EQMHCC1 - ENSECAG00000019928 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000019928
NameEQMHCC1
DescriptionEquus caballus MHC class I heavy chain (EQMHCC1), mRNA [Source:RefSeq mRNA;Acc:NM_001082507]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
557
  • 557
  • 1.03e3
97.59002
  • 97.59002
  • 95.54309
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.67e3
  • 1.67e3
92.78289
  • 92.78289
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
2.48e3
  • 2.48e3
89.24999
  • 89.24999
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
3.09e3
  • 3.09e3
86.61400
  • 86.61400
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
3.16e3
  • 3.16e3
86.31548
  • 86.31548
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
3.87e3
  • 3.87e3
83.21651
  • 83.21651
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
4.30e3
  • 4.30e3
81.34567
  • 81.34567
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
4.36e3
  • 4.36e3
81.10817
  • 81.10817
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
4.40e3
  • 4.40e3
  • 7.02e3
80.91686
  • 80.91686
  • 69.56334
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
4.81e3
  • 4.81e3
79.15496
  • 79.15496
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
5.03e3
  • 5.03e3
  • 6.12e3
  • 8.59e3
  • 1.42e4
78.19977
  • 78.19977
  • 73.48311
  • 62.72937
  • 38.45210
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
5.12e3
  • 5.12e3
  • 1.32e4
77.80219
  • 77.80219
  • 42.58577
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
5.75e3
  • 5.75e3
75.07564
  • 75.07564
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
5.94e3
  • 5.94e3
74.22921
  • 74.22921
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
6.24e3
  • 6.24e3
  • 1.05e4
72.92228
  • 72.92228
  • 54.26612
AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
7.11e3
  • 7.11e3
69.16906
  • 69.16906
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
7.92e3
  • 7.92e3
65.66483
  • 65.66483
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
9.25e3
  • 9.25e3
59.90506
  • 59.90506
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
9.66e3
  • 9.66e3
58.11068
  • 58.11068
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.00e4
  • 1.00e4
56.57857
  • 56.57857
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.20e4
  • 1.20e4
47.80873
  • 47.80873
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLX79893
EnsemblENSECAG00000019928 (EQMHCC1)
Uniprot/SPTREMBLF6WCX4, F6WCX4_HORSE, Q30486, Q30486_HORSE

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