E. caballus Gene: C5orf52 - ENSECAG00000019982 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000019982
NameC5orf52
Descriptionchromosome 5 open reading frame 52 [Source:HGNC Symbol;Acc:HGNC:35121]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.03e3
  • 1.03e3
  • 1.28e3
  • 2.19e3
  • 7.84e3
95.52
  • 95.52
  • 94.44
  • 90.52
  • 66.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
4.91e3
  • 4.91e3
78.72
  • 78.72
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
4.94e3
  • 4.94e3
78.60
  • 78.60
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
5.93e3
  • 5.93e3
74.28
  • 74.28
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
6.12e3
  • 6.12e3
73.48
  • 73.48
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
6.48e3
  • 6.48e3
71.89
  • 71.89
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
6.95e3
  • 6.95e3
69.86
  • 69.86
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
7.25e3
  • 7.25e3
68.57
  • 68.57
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
7.67e3
  • 7.67e3
66.75
  • 66.75
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.80e3
  • 7.80e3
  • 8.75e3
66.18
  • 66.18
  • 62.06
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
7.97e3
  • 7.97e3
65.44
  • 65.44
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
8.01e3
  • 8.01e3
65.25
  • 65.25
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.23e3
  • 8.23e3
  • 8.77e3
64.32
  • 64.32
  • 61.99
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.39e3
  • 8.39e3
  • 1.03e4
63.61
  • 63.61
  • 55.17
AEIR
  • AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
8.44e3
  • 8.44e3
63.41
  • 63.41
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
8.51e3
  • 8.51e3
  • 9.28e3
63.08
  • 63.08
  • 59.74
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.87e3
  • 8.87e3
  • 1.10e4
61.54
  • 61.54
  • 52.46
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
9.53e3
  • 9.53e3
58.67
  • 58.67
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
55.02
  • 55.02
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
54.52
  • 54.52
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
54.33
  • 54.33
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
52.47
  • 52.47
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000019982 (C5orf52)
HGNCHGNC:35121 (C5orf52)
Uniprot/SPTREMBLF7DI94, F7DI94_HORSE

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